RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 DR1Q01658 176 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 DHX34Q14147 1143 aaKnown RBP13.45□□□□□ -0.26
RPAIN-205ENST00000536255 ALG11Q2TAA5 492 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 CCDC157Q569K6 752 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 PRRT3Q5FWE3 981 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 ADAMTSL4Q6UY14 1074 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 RFLNAQ6ZTI6 216 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 HEATR4Q86WZ0 1026 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 PELI3Q8N2H9 469 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 TRAM1L1Q8N609 369 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 OR52K1Q8NGK4 314 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 KIF18AQ8NI77 898 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 DTX3LQ8TDB6 740 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 LMX1AQ8TE12 382 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 LRRC61Q9BV99 259 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 TEX101Q9BY14 249 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 BPIFA1Q9NP55 256 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 IL17CQ9P0M4 197 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 SPASTQ9UBP0 616 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 KLQ9UEF7 1012 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 ASIC3Q9UHC3 531 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 KLK13Q9UKR3 277 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 NEU2Q9Y3R4 380 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 NEUROG3Q9Y4Z2 214 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 PCDHGA1Q9Y5H4 931 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 ARL5AQ9Y689 179 aa13.45□□□□□ -0.26
RPAIN-205ENST00000536255 TMEM202A6NGA9 273 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 TNFRSF10CO14798 259 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 RFPL3O75679 317 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 RASGRP1O95267 797 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 ADCY8P40145 1251 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 MAGEA6P43360 314 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 SRP54P61011 504 aaKnown RBP13.44□□□□□ -0.26
RPAIN-205ENST00000536255 MSLNQ13421 630 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-205ENST00000536255 ITGA9Q13797 1035 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 PTK6Q13882 451 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 SEPT6Q14141 434 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 KCNJ11Q14654 390 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 POU6F1Q14863 301 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 WHAMMP3Q1A5X7 153 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 ALS2CLQ60I27 953 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 ENPP7Q6UWV6 458 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 PCGF5Q86SE9 256 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 HID1Q8IV36 788 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 GPR26Q8NDV2 337 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 SPATA4Q8NEY3 305 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 OR56A4Q8NGH8 313 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 TSACCQ96A04 125 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-205ENST00000536255 PDXPQ96GD0 296 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 HIC2Q96JB3 615 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 DUSP23Q9BVJ7 150 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 LGR4Q9BXB1 951 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 CASS4Q9NQ75 786 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 APPL1Q9UKG1 709 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 CEP295Q9C0D2 2601 aa13.44□□□□□ -0.26
RPAIN-205ENST00000536255 GLYATL1P3A0A0U1RQE8 302 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 HEATR9A2RTY3 570 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 FAM221BA6H8Z2 402 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 LMO7DNF2Z398 122 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 TPP1O14773 563 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 NDC80O14777 642 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 SOD1P00441 154 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 CDK4P11802 303 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 TPH1P17752 444 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 ACP1P24666 158 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 DAB2P98082 770 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 ILKQ13418 452 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 C1orf61Q13536 156 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 ELOCQ15369 112 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 SKIDA1Q1XH10 827 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 DEFB133Q30KQ1 61 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 KCTD16Q68DU8 428 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 ZCCHC8Q6NZY4 707 aaKnown RBP13.43□□□□□ -0.26
RPAIN-205ENST00000536255 LRRC8BQ6P9F7 803 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 NLRP9Q7RTR0 991 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 RD3Q7Z3Z2 195 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 MAATS1Q7Z4T9 603 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 JAMLQ86YT9 394 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 FSTL5Q8N475 847 aaPredicted RBP13.43□□□□□ -0.26
RPAIN-205ENST00000536255 FAM181AQ8N9Y4 354 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 OR4K2Q8NGD2 314 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 STYXQ8WUJ0 223 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 OR1E3Q8WZA6 343 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 CNTNAP3BQ96NU0 1288 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 RANBP9Q96S59 729 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 KRT12Q99456 494 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 CNTNAP3Q9BZ76 1288 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 IL22Q9GZX6 179 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 CLPBQ9H078 707 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 FGF22Q9HCT0 170 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 BFARQ9NZS9 450 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 MSRB2Q9Y3D2 182 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 DGKBQ9Y6T7 804 aa13.43□□□□□ -0.26
RPAIN-205ENST00000536255 SMAPO00193 183 aa13.42□□□□□ -0.26
RPAIN-205ENST00000536255 LDB2O43679 373 aa13.42□□□□□ -0.26
RPAIN-205ENST00000536255 BUD23O43709 281 aaKnown RBP13.42□□□□□ -0.26
RPAIN-205ENST00000536255 TNFP01375 233 aa13.42□□□□□ -0.26
RPAIN-205ENST00000536255 ANXA6P08133 673 aa13.42□□□□□ -0.26
RPAIN-205ENST00000536255 CKMT1AP12532 417 aa13.42□□□□□ -0.26
RPAIN-205ENST00000536255 CTSEP14091 401 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms