RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 PCDHB12Q9Y5F1 795 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 HEATR9A2RTY3 570 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 RGS13O14921 159 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 ZBTB24O43167 697 aaPredicted RBP13.93□□□□□ -0.18
LIG1-203ENST00000536218 PARNO95453 639 aaKnown RBP13.93□□□□□ -0.18
LIG1-203ENST00000536218 GRSF1Q12849 480 aaKnown RBP eCLIP13.93□□□□□ -0.18
LIG1-203ENST00000536218 SNAP47Q5SQN1 464 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 NEK5Q6P3R8 708 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 FAM171BQ6P995 826 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 KIAA0408Q6ZU52 694 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 BNIPLQ7Z465 357 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 CMC1Q7Z7K0 106 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 DCP2Q8IU60 420 aaKnown RBP13.93□□□□□ -0.18
LIG1-203ENST00000536218 ZFYVE19Q96K21 471 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 SYBUQ9NX95 663 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 DCDC2Q9UHG0 476 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 DFFAO00273 331 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 BCAS1O75363 584 aaPredicted RBP13.93□□□□□ -0.18
LIG1-203ENST00000536218 CCNKO75909 580 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 JCHAINP01591 159 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 TPH1P17752 444 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 HDCP19113 662 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 SOX11P35716 441 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 MAGEA6P43360 314 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 STX1BP61266 288 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 AQP6Q13520 282 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 DDR2Q16832 855 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 BTBD8Q5XKL5 378 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 SEL1L3Q68CR1 1132 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 CCDC103Q8IW40 242 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 PARP8Q8N3A8 854 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 DHRSXQ8N5I4 330 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 VPS33AQ96AX1 596 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 EGLN2Q96KS0 407 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 DSEQ9UL01 958 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 FIS1Q9Y3D6 152 aa13.93□□□□□ -0.18
LIG1-203ENST00000536218 PRORSD1PA6NEY8 169 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 M0QX08 132 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 DLGAP1O14490 977 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 PTPN3P26045 913 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 GPR15P49685 360 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 GNG2P59768 71 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 VAC14Q08AM6 782 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 MBTPS1Q14703 1052 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 PAFAH1B3Q15102 231 aaKnown RBP13.92□□□□□ -0.18
LIG1-203ENST00000536218 PDZD4Q76G19 769 aaPredicted RBP13.92□□□□□ -0.18
LIG1-203ENST00000536218 MAGEE2Q8TD90 523 aaPredicted RBP13.92□□□□□ -0.18
LIG1-203ENST00000536218 ILKAPQ9H0C8 392 aaPredicted RBP13.92□□□□□ -0.18
LIG1-203ENST00000536218 ING2Q9H160 280 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 ITM2CQ9NQX7 267 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 OAZ3Q9UMX2 235 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 PCDHA11Q9Y5I1 949 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 LAMA3Q16787 3333 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 EI24O14681 340 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 F9P00740 461 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 ERVK-10P10266 1014 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 ATP6V0D1P61421 351 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 GATAD2AQ86YP4 633 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 ASCC1Q8N9N2 400 aaKnown RBP13.92□□□□□ -0.18
LIG1-203ENST00000536218 LRRC39Q96DD0 335 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 SLC9A7Q96T83 725 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 CSNK1G1Q9HCP0 422 aa13.92□□□□□ -0.18
LIG1-203ENST00000536218 TCAF2A6NFQ2 919 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 TRIM64BA6NI03 449 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 CDK2AP1O14519 115 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 ALDH1A1P00352 501 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 GRK4P32298 578 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 MAGEA3P43357 314 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 ABCG1P45844 678 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 GLUD2P49448 558 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 PLA2G16P53816 162 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 ZIK1Q3SY52 487 aaPredicted RBP13.91□□□□□ -0.18
LIG1-203ENST00000536218 SLC36A3Q495N2 470 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 ARHGAP36Q6ZRI8 547 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 KDELC2Q7Z4H8 507 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 DHFR2Q86XF0 187 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 LGI2Q8N0V4 545 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 POC5Q8NA72 575 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 SEPT8Q92599 483 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 SGCDQ92629 289 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 FAM193BQ96PV7 902 aaPredicted RBP13.91□□□□□ -0.18
LIG1-203ENST00000536218 CHID1Q9BWS9 393 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 EMILIN2Q9BXX0 1053 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 GPBP1L1Q9HC44 474 aaPredicted RBP13.91□□□□□ -0.18
LIG1-203ENST00000536218 LAMA2P24043 3122 aaKnown RBP13.91□□□□□ -0.18
LIG1-203ENST00000536218 FAM159BA6NKW6 160 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 RAD51BO15315 384 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 RFPL2O75678 378 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 SOAT2O75908 522 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 BMP4P12644 408 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 CXCR3P49682 368 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 FPGSQ05932 587 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 PIGFQ07326 219 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 TRIM71Q2Q1W2 868 aaKnown RBP13.91□□□□□ -0.18
LIG1-203ENST00000536218 CLLU1OSQ5K130 101 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 ANKFN1Q8N957 763 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 NTAN1Q96AB6 310 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 DACH2Q96NX9 599 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 AKIP1Q9NQ31 210 aa13.91□□□□□ -0.18
LIG1-203ENST00000536218 CCDC177Q9NQR7 707 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms