RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PLIN5Q00G26 463 aa4.2□□□□□ -1.74
VBP1-203ENST00000535916 ZC2HC1CQ53FD0 456 aaPredicted RBP4.2□□□□□ -1.74
VBP1-203ENST00000535916 RRM2BQ7LG56 351 aa4.2□□□□□ -1.74
VBP1-203ENST00000535916 GPR180Q86V85 440 aa4.2□□□□□ -1.74
VBP1-203ENST00000535916 NRROSQ86YC3 692 aa4.2□□□□□ -1.74
VBP1-203ENST00000535916 MAP7D3Q8IWC1 876 aa4.2□□□□□ -1.74
VBP1-203ENST00000535916 ARHGEF26Q96DR7 871 aa4.2□□□□□ -1.74
VBP1-203ENST00000535916 KLHL15Q96M94 604 aa4.2□□□□□ -1.74
VBP1-203ENST00000535916 SLC25A10Q9UBX3 287 aaPredicted RBP4.2□□□□□ -1.74
VBP1-203ENST00000535916 PCDHGB3Q9Y5G1 929 aa4.2□□□□□ -1.74
VBP1-203ENST00000535916 KIAA1210Q9ULL0 1709 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 A0A0G2JLW4 131 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 PSMC2P35998 433 aaKnown RBP4.19□□□□□ -1.74
VBP1-203ENST00000535916 GABRB2P47870 512 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 GNAQP50148 359 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 CLDN20P56880 219 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 DSCR10P59022 87 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 COG7P83436 770 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 UBE3AQ05086 875 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 SIGIRRQ6IA17 410 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 ANO5Q75V66 913 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 LRRC8DQ7L1W4 858 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 THAP6Q8TBB0 222 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 SLC44A1Q8WWI5 657 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 ZNF653Q96CK0 615 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 PDZD7Q9H5P4 517 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 BICC1Q9H694 974 aaKnown RBP4.19□□□□□ -1.74
VBP1-203ENST00000535916 ACSS1Q9NUB1 689 aaPredicted RBP4.19□□□□□ -1.74
VBP1-203ENST00000535916 MARCH4Q9P2E8 410 aaPredicted RBP4.19□□□□□ -1.74
VBP1-203ENST00000535916 FBXL2Q9UKC9 423 aa4.19□□□□□ -1.74
VBP1-203ENST00000535916 A0A087X002 238 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 LDLRAD4O15165 306 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 NCAM2O15394 837 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 ZNF26P17031 533 aaPredicted RBP4.18□□□□□ -1.74
VBP1-203ENST00000535916 GRIK2Q13002 908 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 TMEM187Q14656 261 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 DECR1Q16698 335 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 COL28A1Q2UY09 1125 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 ZFP69Q49AA0 526 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 C18orf63Q68DL7 685 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 ZNF790Q6PG37 636 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 CPOQ8IVL8 374 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 SPAG16Q8N0X2 631 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 TAAR8Q969N4 342 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 ZNF689Q96CS4 500 aaPredicted RBP4.18□□□□□ -1.74
VBP1-203ENST00000535916 SENP5Q96HI0 755 aaPredicted RBP4.18□□□□□ -1.74
VBP1-203ENST00000535916 CDK19Q9BWU1 502 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 PAK5Q9P286 719 aa4.18□□□□□ -1.74
VBP1-203ENST00000535916 CCDC194A0A1B0GVG4 234 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 PSMD14O00487 310 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 NBNO60934 754 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 COX7A2P14406 83 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.17□□□□□ -1.74
VBP1-203ENST00000535916 SPOCK1Q08629 439 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 SLC9B1Q4ZJI4 515 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 C10orf62Q5T681 223 aaPredicted RBP4.17□□□□□ -1.74
VBP1-203ENST00000535916 PIWIL4Q7Z3Z4 852 aaKnown RBP4.17□□□□□ -1.74
VBP1-203ENST00000535916 RBM15BQ8NDT2 890 aaKnown RBP4.17□□□□□ -1.74
VBP1-203ENST00000535916 APBB2Q92870 758 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 OPRPNQ99935 248 aaPredicted RBP4.17□□□□□ -1.74
VBP1-203ENST00000535916 UBXN6Q9BZV1 441 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 RIC8AQ9NPQ8 531 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 NOTCH2Q04721 2471 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 UTYO14607 1347 aa4.17□□□□□ -1.74
VBP1-203ENST00000535916 SNAP23O00161 211 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 CSF2RAP15509 400 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 ZNF23P17027 643 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 AZU1P20160 251 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 SP100P23497 879 aaPredicted RBP4.16□□□□□ -1.74
VBP1-203ENST00000535916 MAP2K2P36507 400 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 FOXD4Q12950 439 aaPredicted RBP4.16□□□□□ -1.74
VBP1-203ENST00000535916 ITGA9Q13797 1035 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 USP41Q3LFD5 358 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 DCST1Q5T197 706 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 SUSD1Q6UWL2 747 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 NKAPQ8N5F7 415 aaKnown RBP4.16□□□□□ -1.74
VBP1-203ENST00000535916 SPATA5Q8NB90 893 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 ZNF473Q8WTR7 871 aaKnown RBP4.16□□□□□ -1.74
VBP1-203ENST00000535916 HERVK_113Q902F9 699 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 PPP1R13BQ96KQ4 1090 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 ZSCAN31Q96LW9 406 aaPredicted RBP4.16□□□□□ -1.74
VBP1-203ENST00000535916 WDR13Q9H1Z4 485 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 ERVMER34-1Q9H9K5 563 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 TCP11L1Q9NUJ3 509 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 CACNG5Q9UF02 275 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 ACAD8Q9UKU7 415 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 AAR2Q9Y312 384 aaKnown RBP4.16□□□□□ -1.74
VBP1-203ENST00000535916 JRKLQ9Y4A0 524 aa4.16□□□□□ -1.74
VBP1-203ENST00000535916 OR5K3A6NET4 321 aa4.15□□□□□ -1.75
VBP1-203ENST00000535916 C5orf60A6NFR6 353 aa4.15□□□□□ -1.75
VBP1-203ENST00000535916 USP17L23D6RBM5 183 aa4.15□□□□□ -1.75
VBP1-203ENST00000535916 TNPO2O14787 897 aaKnown RBP4.15□□□□□ -1.75
VBP1-203ENST00000535916 ARHGEF9O43307 516 aa4.15□□□□□ -1.75
VBP1-203ENST00000535916 SEC31AO94979 1220 aaKnown RBP4.15□□□□□ -1.75
VBP1-203ENST00000535916 TSHBP01222 138 aa4.15□□□□□ -1.75
VBP1-203ENST00000535916 NR3C1P04150 777 aa4.15□□□□□ -1.75
VBP1-203ENST00000535916 HOXB5P09067 269 aa4.15□□□□□ -1.75
VBP1-203ENST00000535916 CDAP32320 146 aa4.15□□□□□ -1.75
VBP1-203ENST00000535916 GGT5P36269 586 aa4.15□□□□□ -1.75
VBP1-203ENST00000535916 UBA7P41226 1012 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms