RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 TCAF1Q9Y4C2 921 aa11.98□□□□□ -0.49
CHD4-203ENST00000535717 EFCAB8A8MWE9 144 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 TP73O15350 636 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 GPR39O43194 453 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 UGT1A9O60656 530 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 SEC31AO94979 1220 aaKnown RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 FUCA1P04066 466 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 CEACAM5P06731 702 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 ZNF883P0CG24 379 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 UGT1A6P19224 532 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 UGT1A1P22309 533 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 UGT1A4P22310 534 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 KELP23276 732 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 CA5AP35218 305 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 UGT1A3P35503 534 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 UGT1A5P35504 534 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 HADHAP40939 763 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 MAGEA3P43357 314 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 RPL21P46778 160 aaKnown RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 POLD2P49005 469 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 ARRB1P49407 418 aaPredicted RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 CCT8P50990 548 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 ARSDP51689 593 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 LIMK1P53667 647 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 SRP54P61011 504 aaKnown RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 BNIP3Q12983 259 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 PEX6Q13608 980 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 LAMB3Q13751 1172 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 UAP1L1Q3KQV9 507 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 PCID2Q5JVF3 399 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 TSTD2Q5T7W7 516 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 DOK6Q6PKX4 331 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 HOOK3Q86VS8 718 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 MNS1Q8NEH6 495 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 PPHLN1Q8NEY8 458 aaKnown RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 OR56A4Q8NGH8 313 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 PTCD2Q8WV60 388 aaKnown RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 BTN2A2Q8WVV5 523 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 GLYATL1Q969I3 302 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 SNF8Q96H20 258 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 VPS35Q96QK1 796 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 IL22Q9GZX6 179 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 TCEAL2Q9H3H9 227 aaPredicted RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 SUDS3Q9H7L9 328 aaPredicted RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 UGT1A7Q9HAW7 530 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 UGT1A10Q9HAW8 530 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 UGT1A8Q9HAW9 530 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 XAB2Q9HCS7 855 aaKnown RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 ARFGAP3Q9NP61 516 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 MRPL40Q9NQ50 206 aaKnown RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 CHRAC1Q9NRG0 131 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 TM7SF3Q9NS93 570 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 SYBUQ9NX95 663 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 KLQ9UEF7 1012 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 SLC2A6Q9UGQ3 507 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 APPL1Q9UKG1 709 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 RIMKLBQ9ULI2 386 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 SNX24Q9Y343 169 aa11.97□□□□□ -0.49
CHD4-203ENST00000535717 OAS3Q9Y6K5 1087 aaKnown RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 ZNF106Q9H2Y7 1883 aaKnown RBP11.97□□□□□ -0.49
CHD4-203ENST00000535717 ASCC3Q8N3C0 2202 aaKnown RBP11.96□□□□□ -0.49
CHD4-203ENST00000535717 SPTBN4Q9H254 2564 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 H7C0S8 307 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 TNFRSF10CO14798 259 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 SDC3O75056 442 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 SRP72O76094 671 aaKnown RBP11.96□□□□□ -0.49
CHD4-203ENST00000535717 SLC25A14O95258 325 aaPredicted RBP11.96□□□□□ -0.49
CHD4-203ENST00000535717 PRAMEF1O95521 474 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 CD59P13987 128 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 JUNDP17535 347 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 EPHA8P29322 1005 aaPredicted RBP11.96□□□□□ -0.49
CHD4-203ENST00000535717 HK3P52790 923 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 ITGA8P53708 1063 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 ARHGAP8P85298 464 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 PPARDQ03181 441 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 ACVR1Q04771 509 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 DMTNQ08495 405 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 MORF4L2Q15014 288 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 SKIDA1Q1XH10 827 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 ZNF648Q5T619 568 aaPredicted RBP11.96□□□□□ -0.49
CHD4-203ENST00000535717 DUPD1Q68J44 220 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 HIBCHQ6NVY1 386 aaPredicted RBP11.96□□□□□ -0.49
CHD4-203ENST00000535717 NLRP9Q7RTR0 991 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 KANSL1Q7Z3B3 1105 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 RD3Q7Z3Z2 195 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 GATAD2AQ86YP4 633 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 HID1Q8IV36 788 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 PHACTR4Q8IZ21 702 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 RBFAQ8N0V3 343 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 AGGF1Q8N302 714 aaeCLIP11.96□□□□□ -0.49
CHD4-203ENST00000535717 MPP5Q8N3R9 675 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 MMGT1Q8N4V1 131 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 NOA1Q8NC60 698 aaKnown RBP11.96□□□□□ -0.49
CHD4-203ENST00000535717 OR13J1Q8NGT2 312 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 ZNF398Q8TD17 642 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 NETO1Q8TDF5 533 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 SAP25Q8TEE9 199 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 PDXPQ96GD0 296 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 CDKN2AIPNLQ96HQ2 116 aa11.96□□□□□ -0.49
CHD4-203ENST00000535717 TBATAQ96M53 351 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms