RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 CTAGE9A4FU28 777 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 LDB2O43679 373 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 PPFIA2O75334 1257 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 DKK1O94907 266 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 CRTAMO95727 393 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 ANXA6P08133 673 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 ADRB1P08588 477 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 GRIA1P42261 906 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 ZNF140P52738 457 aaPredicted RBP22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 DNAJC3Q13217 504 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 CHRNA6Q15825 494 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 HS1BP3Q53T59 392 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 SDR16C5Q8N3Y7 309 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 OR4K2Q8NGD2 314 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 OR52K1Q8NGK4 314 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 GLYATL1Q969I3 302 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 SAR1BQ9Y6B6 198 aa22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 TDRD6O60522 2096 aaKnown RBP22.54■■□□□ 1.2
SFSWAP-204ENST00000535399 COL5A1P20908 1838 aaPredicted RBP22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 LY6G6EA0A0G2JKS1 128 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 E7EVH7 732 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 PHF2O75151 1096 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 APRTP07741 180 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 CKMT2P17540 419 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 GNPDA1P46926 289 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 LMAN1P49257 510 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 ACADVLP49748 655 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 ATP13A5Q4VNC0 1218 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 ZCCHC8Q6NZY4 707 aaKnown RBP22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 LVRNQ6Q4G3 990 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 FAM151BQ6UXP7 276 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 CREG2Q8IUH2 290 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 CCL4L1Q8NHW4 92 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 APOLD1Q96LR9 279 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 VPS35Q96QK1 796 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 SUDS3Q9H7L9 328 aaPredicted RBP22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 ARFGAP3Q9NP61 516 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 EIF2B3Q9NR50 452 aaKnown RBP22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 TRNAU1APQ9NX07 287 aaKnown RBP22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 VPS18Q9P253 973 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 NEU2Q9Y3R4 380 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 PCYT1BQ9Y5K3 369 aaPredicted RBP22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 U3KQA8 63 aa22.53■■□□□ 1.2
SFSWAP-204ENST00000535399 GOLGA6L10A0A0M3HER8 536 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 GLYATL1P3A0A0U1RQE8 302 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 DNAJC6O75061 913 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 SLC25A14O95258 325 aaPredicted RBP22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 ASMTLO95671 621 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 MYF5P13349 255 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 ADCY8P40145 1251 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 FNTAP49354 379 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 PDE1BQ01064 536 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 TRIP13Q15645 432 aaPredicted RBP22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 PYCR3Q53H96 274 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 C6orf132Q5T0Z8 1188 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 ZNF648Q5T619 568 aaPredicted RBP22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 CCDC137Q6PK04 289 aaKnown RBP22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 MARK2Q7KZI7 788 aaKnown RBP22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 GKN2Q86XP6 184 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 OR13C4Q8NGS5 318 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 GPBAR1Q8TDU6 330 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 C19orf43Q9BQ61 176 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 BOCQ9BWV1 1114 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 CASS4Q9NQ75 786 aa22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 APOBEC2Q9Y235 224 aaKnown RBP22.52■■□□□ 1.2
SFSWAP-204ENST00000535399 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 GPR39O43194 453 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 UGT1A9O60656 530 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 KRT14P02533 472 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 CKMT1AP12532 417 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 UGT1A6P19224 532 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 UGT1A1P22309 533 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 UGT1A4P22310 534 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 PMLP29590 882 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 CA5AP35218 305 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 UGT1A3P35503 534 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 UGT1A5P35504 534 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 CDH17Q12864 832 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 POU6F1Q14863 301 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 PPP1R21Q6ZMI0 780 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 TAF8Q7Z7C8 310 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 ADGRG6Q86SQ4 1221 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 NRROSQ86YC3 692 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 PHYKPLQ8IUZ5 450 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 PNPLA1Q8N8W4 532 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 CAPZA3Q96KX2 299 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 OR2M4Q96R27 311 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 UGT1A7Q9HAW7 530 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 UGT1A10Q9HAW8 530 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 UGT1A8Q9HAW9 530 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 TRIM39Q9HCM9 518 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 ATXN10Q9UBB4 475 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 FKBPLQ9UIM3 349 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 DOLKQ9UPQ8 538 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 ST14Q9Y5Y6 855 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 LRP4O75096 1905 aa22.51■■□□□ 1.19
SFSWAP-204ENST00000535399 ZNF8P17098 575 aaPredicted RBP22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 ACP1P24666 158 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 VPS41P49754 854 aa22.5■■□□□ 1.19
SFSWAP-204ENST00000535399 ETF1P62495 437 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms