RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 POLD2P49005 469 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 RPL26P61254 145 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 PPIDQ08752 370 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 TCEAL1Q15170 157 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 SLC9A4Q6AI14 798 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 RAET1GQ6H3X3 334 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 ATCAYQ86WG3 371 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 SLITRK4Q8IW52 837 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 NRSN1Q8IZ57 195 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 NAGSQ8N159 534 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 NDUFAF2Q8N183 169 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 PAF1Q8N7H5 531 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 CNTD1Q8N815 330 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 ZDHHC1Q8WTX9 485 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 JPH3Q8WXH2 748 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 TMEM74Q96NL1 305 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 AGAP2Q99490 1192 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 GSDMCQ9BYG8 508 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 DPEP2Q9H4A9 486 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 NHEJ1Q9H9Q4 299 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 CARS2Q9HA77 564 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 ABHD10Q9NUJ1 306 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 TAAR2Q9P1P5 351 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 CNOT6Q9ULM6 557 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 RPL26L1Q9UNX3 145 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 LOXL2Q9Y4K0 774 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 ITPR2Q14571 2701 aa10.01□□□□□ -0.81
CLSTN3-203ENST00000534830 B4DGG1 531 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 CBFA2T2O43439 604 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 DNAJC6O75061 913 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 AGFG2O95081 481 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 CLDN7O95471 211 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 PYGLP06737 847 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 GJC1P36383 396 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 GPR1P46091 355 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 GNPDA1P46926 289 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 MAPK10P53779 464 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 MAZP56270 477 aaKnown RBP10□□□□□ -0.81
CLSTN3-203ENST00000534830 IFI35P80217 286 aaPredicted RBP10□□□□□ -0.81
CLSTN3-203ENST00000534830 CTBSQ01459 385 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 ITKQ08881 620 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 ZBTB17Q13105 803 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 TBX2Q13207 712 aaPredicted RBP10□□□□□ -0.81
CLSTN3-203ENST00000534830 SQSTM1Q13501 440 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 MESDQ14696 234 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 SKOR2Q2VWA4 1001 aaPredicted RBP10□□□□□ -0.81
CLSTN3-203ENST00000534830 PYCR3Q53H96 274 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 LRRC38Q5VT99 294 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 CCDC13Q8IYE1 715 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 Q8N9G6 341 aaPredicted RBP10□□□□□ -0.81
CLSTN3-203ENST00000534830 KIAA1524Q8TCG1 905 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 USP7Q93009 1102 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 SCAMP4Q969E2 229 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 TADA1Q96BN2 335 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 AP2M1Q96CW1 435 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 EID2BQ96D98 161 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 SLC12A9Q9BXP2 914 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 PCDH9Q9HC56 1237 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 FOXJ2Q9P0K8 574 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 CD84Q9UIB8 345 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 MOSPD1Q9UJG1 213 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 TUBD1Q9UJT1 453 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 DNPEPQ9ULA0 475 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 PLEKHM1Q9Y4G2 1056 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 C2CD3Q4AC94 2353 aa10□□□□□ -0.81
CLSTN3-203ENST00000534830 ANKRD66B4E2M5 251 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 PPM1DO15297 605 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 MTSS1O43312 755 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 AKR1B10O60218 316 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 MFAP3LO75121 409 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 ECEL1O95672 775 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 JCHAINP01591 159 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 ETV5P41161 510 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 GPR3P46089 330 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 SPINT3P49223 89 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 ILF3Q12906 894 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 TAZQ16635 292 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 CLPPQ16740 277 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 QPCTQ16769 361 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 HENMT1Q5T8I9 393 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 DTX1Q86Y01 620 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 RHOT2Q8IXI1 618 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 EXD1Q8NHP7 514 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 C9orf43Q8TAL5 461 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 PATE1Q8WXA2 126 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 TMEM159Q96B96 161 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 OLFM3Q96PB7 478 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 TRIB3Q96RU7 358 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 B3GNT4Q9C0J1 378 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 DEF6Q9H4E7 631 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 SPTLC3Q9NUV7 552 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 HAUS2Q9NVX0 235 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 INTUQ9ULD6 942 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 TMEM98Q9Y2Y6 226 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 PCYT1BQ9Y5K3 369 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 SDK2Q58EX2 2172 aa9.99□□□□□ -0.81
CLSTN3-203ENST00000534830 RGSL1A5PLK6 1076 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 GOLGA6CA6NDK9 693 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 GOLGA6BA6NDN3 693 aa9.98□□□□□ -0.81
CLSTN3-203ENST00000534830 FADS2P1A8MWK0 482 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms