RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 FMO4P31512 558 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 PLCB4Q15147 1175 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 CRY2Q49AN0 593 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 ZNF766Q5HY98 468 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 SUSD4Q5VX71 490 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 CCDC129Q6ZRS4 1044 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 CREB3L2Q70SY1 520 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 RSRC2Q7L4I2 434 aaKnown RBP3.56□□□□□ -1.84
USP48-215ENST00000534705 COPS6Q7L5N1 327 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 MAATS1Q7Z4T9 603 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 ADGRG6Q86SQ4 1221 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 CHD1LQ86WJ1 897 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 TMPRSS12Q86WS5 348 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 NGEFQ8N5V2 710 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 AADATQ8N5Z0 425 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 NEXN-AS1Q8NBZ9 246 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 NAXEQ8NCW5 288 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 RASSF8Q8NHQ8 419 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 GPT2Q8TD30 523 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 STAMQ92783 540 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 SNAPC3Q92966 411 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 ELP4Q96EB1 424 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 YME1L1Q96TA2 773 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 EYA3Q99504 573 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 CCDC94Q9BW85 323 aaPredicted RBP3.56□□□□□ -1.84
USP48-215ENST00000534705 C6orf106Q9H6K1 298 aaPredicted RBP3.56□□□□□ -1.84
USP48-215ENST00000534705 NDRG3Q9UGV2 375 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 NIP7Q9Y221 180 aaKnown RBP eCLIP3.56□□□□□ -1.84
USP48-215ENST00000534705 PCDHGB5Q9Y5G0 923 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 FOCADQ5VW36 1801 aa3.56□□□□□ -1.84
USP48-215ENST00000534705 PCNTO95613 3336 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 OTOFQ9HC10 1997 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 AK9Q5TCS8 1911 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 A0A0U1RQF3 1178 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 CCDC196A0A1B0GTZ2 297 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 PABPN1LA6NDY0 278 aaKnown RBP3.55□□□□□ -1.84
USP48-215ENST00000534705 IFITM10A6NMD0 228 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 TEX22C9J3V5 150 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 TULP2O00295 520 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 NCAM2O15394 837 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 FIBPO43427 364 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 GAGE7O76087 117 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 PPP1R3DO95685 299 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 IFIT1P09914 478 aaKnown RBP3.55□□□□□ -1.84
USP48-215ENST00000534705 GAGE12FP0CL80 117 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 GAGE12GP0CL81 117 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 GAGE12IP0CL82 117 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 DAOP14920 347 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 SRD5A1P18405 259 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 CD58P19256 250 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 GPTP24298 496 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 ARL1P40616 181 aaPredicted RBP3.55□□□□□ -1.84
USP48-215ENST00000534705 GAS1P54826 345 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 NR1H2P55055 460 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 CYP4A11Q02928 519 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 GAGE1Q13065 139 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 GAGE4Q13068 117 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 PPP6R3Q5H9R7 873 aaPredicted RBP3.55□□□□□ -1.84
USP48-215ENST00000534705 SLC10A5Q5PT55 438 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 SERTAD4-AS1Q5TG53 156 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 G2E3Q7L622 706 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 TBC1D26Q86UD7 250 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 CUZD1Q86UP6 607 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 FAM160B2Q86V87 743 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 FJX1Q86VR8 437 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 TMTC1Q8IUR5 882 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 WDR63Q8IWG1 891 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 MB21D2Q8IYB1 491 aaPredicted RBP3.55□□□□□ -1.84
USP48-215ENST00000534705 CCDC105Q8IYK2 499 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 CNBD1Q8NA66 436 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 C11orf65Q8NCR3 313 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 ZCCHC10Q8TBK6 192 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 TRIB2Q92519 343 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 ERP27Q96DN0 273 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 TXNDC15Q96J42 360 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 LMLNQ96KR4 655 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 FUZQ9BT04 418 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 GPR63Q9BZJ6 419 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 INTS2Q9H0H0 1204 aaKnown RBP3.55□□□□□ -1.84
USP48-215ENST00000534705 PPP1R14DQ9NXH3 145 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 KIAA1456Q9P272 454 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 DBF4Q9UBU7 674 aaPredicted RBP3.55□□□□□ -1.84
USP48-215ENST00000534705 CNOT7Q9UIV1 285 aaKnown RBP3.55□□□□□ -1.84
USP48-215ENST00000534705 HSF4Q9ULV5 492 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 TBX20Q9UMR3 447 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 NOL7Q9UMY1 257 aaKnown RBP3.55□□□□□ -1.84
USP48-215ENST00000534705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.55□□□□□ -1.84
USP48-215ENST00000534705 PAM16Q9Y3D7 125 aa3.55□□□□□ -1.84
USP48-215ENST00000534705 DOCK2Q92608 1830 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 PAPPA2Q9BXP8 1791 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 ITIH6Q6UXX5 1313 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 RAD50Q92878 1312 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 BTBD18B2RXH4 712 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 H0YIN7 160 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 TAF4O00268 1085 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 SLC25A17O43808 307 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 NDUFB4O95168 129 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 PAPSS2O95340 614 aaPredicted RBP3.54□□□□□ -1.84
USP48-215ENST00000534705 VNN2O95498 520 aa3.54□□□□□ -1.84
USP48-215ENST00000534705 ZNF12P17014 697 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms