RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	VCPIP1	Q96JH7	1222 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CASD1	Q96PB1	797 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SNX18	Q96RF0	628 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FNBP1	Q96RU3	617 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CINP	Q9BW66	212 aa	Predicted RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TMEM117	Q9H0C3	514 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PNN	Q9H307	717 aa	Known RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SLC38A10	Q9HBR0	1119 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ABHD10	Q9NUJ1	306 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PADI3	Q9ULW8	664 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LAS1L	Q9Y4W2	734 aa	Known RBP	4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SCIN	Q9Y6U3	715 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	VWA8	A3KMH1	1905 aa		4.74	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GRM8	O00222	908 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FLRT2	O43155	660 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SPRY1	O43609	319 aa	Predicted RBP	4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	URI1	O94763	535 aa	Predicted RBP	4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	C1R	P00736	705 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MYCL	P12524	364 aa	Predicted RBP	4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LYL1	P12980	280 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	IGFBP2	P18065	325 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FCAR	P24071	287 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CXCR5	P32302	372 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PNPLA4	P41247	253 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CRYBB1	P53674	252 aa	Predicted RBP	4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	BLOC1S1	P78537	153 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GALNT2	Q10471	571 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GRIK2	Q13002	908 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GAB1	Q13480	694 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	BAK1	Q16611	211 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PLAC9	Q5JTB6	97 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MZT2B	Q6NZ67	158 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	WDR93	Q6P2C0	686 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	DENND1B	Q6P3S1	775 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MTHFD1L	Q6UB35	978 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	KIRREL2	Q6UWL6	708 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	DSTYK	Q6XUX3	929 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RABEPK	Q7Z6M1	372 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SFTPA1	Q8IWL2	248 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ANKRD44	Q8N8A2	993 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CENPI	Q92674	756 aa	Predicted RBP	4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SGF29	Q96ES7	293 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PPP1R10	Q96QC0	940 aa	Known RBP	4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	APOL6	Q9BWW8	343 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PRDM13	Q9H4Q3	707 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	USP29	Q9HBJ7	922 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PDE11A	Q9HCR9	933 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SNX15	Q9NRS6	342 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SETD4	Q9NVD3	440 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	IRAK4	Q9NWZ3	460 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SEMA5B	Q9P283	1151 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	AASS	Q9UDR5	926 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ADD3	Q9UEY8	706 aa	Known RBP	4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FZD4	Q9ULV1	537 aa		4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	COPG1	Q9Y678	874 aa	Known RBP	4.73	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MYBPHL	A2RUH7	354 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LINC00473	A8K010	186 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PEX12	O00623	359 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RTN2	O75298	545 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CENPB	P07199	599 aa	Predicted RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	APEH	P13798	732 aa	Known RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	KLK2	P20151	261 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MATN1	P21941	496 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SFPQ	P23246	707 aa	Known RBP eCLIP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ABCD3	P28288	659 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	DUSP1	P28562	367 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PSMC2	P35998	433 aa	Known RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	GRIA3	P42263	894 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	PCP4	P48539	62 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	AGTR2	P50052	363 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ART1	P52961	327 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	OAZ1	P54368	228 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ERVPABLB-1	P60509	514 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FOXI1	Q12951	378 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	THOC5	Q13769	683 aa	Known RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	USH1G	Q495M9	461 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MIIP	Q5JXC2	388 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LIPM	Q5VYY2	423 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ERICH6B	Q5W0A0	696 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ANKRD16	Q6P6B7	361 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	TMEM179	Q6ZVK1	233 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LAS2	Q8IYD9	372 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	LCORL	Q8N3X6	602 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FRMD1	Q8N878	549 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	BEND2	Q8NDZ0	799 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	RLN3	Q8WXF3	142 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	NDRG1	Q92597	394 aa	Known RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	C7orf26	Q96N11	449 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	FUZ	Q9BT04	418 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	CLPB	Q9H078	707 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	STN1	Q9H668	368 aa	Known RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	C8orf33	Q9H7E9	229 aa	Predicted RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MTMR4	Q9NYA4	1195 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	ESPL1	Q14674	2120 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	MYH1	P12882	1939 aa		4.72	□□□□□ -1.65
ECHDC1-223	ENST00000534442	SVEP1	Q4LDE5	3571 aa		4.71	□□□□□ -1.65

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