RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ATP6V1C2Q8NEY4 427 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 Q96MT0 163 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 FGFBP2Q9BYJ0 223 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 CACNG4Q9UBN1 327 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 GGA2Q9UJY4 613 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 MRC1P22897 1456 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TRBC1P01850 177 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 EPHA3P29320 983 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 GPD2P43304 727 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 NDST2P52849 883 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 DAOAP59103 153 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 SLC10A6Q3KNW5 377 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TTC23Q5W5X9 447 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 SPESP1Q6UW49 350 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 DEF8Q6ZN54 512 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 PLD5Q8N7P1 536 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 MAGEE2Q8TD90 523 aaPredicted RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 WFIKKN2Q8TEU8 576 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 STK32AQ8WU08 396 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ALG3Q92685 438 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 APOLD1Q96LR9 279 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 DDX18Q9NVP1 670 aaKnown RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 CLN6Q9NWW5 311 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 SIRPGQ9P1W8 387 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ABI3Q9P2A4 366 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 MFHAS1Q9Y4C4 1052 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TRAF6Q9Y4K3 522 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 NEURL4Q96JN8 1562 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ZNF536O15090 1300 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 RCCD1A6NED2 376 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TNFAIP8O95379 198 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ASLP04424 464 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 LMO2P25791 158 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 CDH5P33151 784 aaPredicted RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 USP46P62068 366 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 LGALS3BPQ08380 585 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 RFTN2Q52LD8 501 aaPredicted RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 UBXN11Q5T124 520 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 C10orf107Q8IVU9 208 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 RTL3Q8N8U3 475 aaKnown RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 RP9Q8TA86 221 aaKnown RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 HMCESQ96FZ2 354 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TBATAQ96M53 351 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TSSK3Q96PN8 268 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ATG10Q9H0Y0 220 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 GBA3Q9H227 469 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 EFCAB10A6NFE3 127 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 WWP2O00308 870 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ENPP3O14638 875 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 MATN3O15232 486 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TEX28O15482 410 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 SLC22A3O75751 556 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ATP6V1G2O95670 118 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 C2P06681 752 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TNFRSF8P28908 595 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 NRIP1P48552 1158 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 SLC25A3Q00325 362 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 MYBPC1Q00872 1141 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 BNIP2Q12982 314 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 NR1D2Q14995 579 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 DLG2Q15700 870 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TIGD5Q53EQ6 642 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ARHGAP36Q6ZRI8 547 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 CUZD1Q86UP6 607 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 GPR21Q99679 349 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 CCDC177Q9NQR7 707 aaPredicted RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 PRDM8Q9NQV8 689 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 C3orf18Q9UK00 162 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ZNF490Q9ULM2 529 aaPredicted RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ZMPSTE24O75844 475 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 GJA1P17302 382 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 GNPDA1P46926 289 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ZNF132P52740 706 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 SPIBQ01892 262 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 IL10RBQ08334 325 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 LPIN1Q14693 890 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 PDGFRLQ15198 375 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 PDK4Q16654 411 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 LRRC73Q5JTD7 316 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 MSANTD2Q6P1R3 559 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 TMEM220Q6QAJ8 160 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 RPTNQ6XPR3 784 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ZNF662Q6ZS27 426 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 KIAA0408Q6ZU52 694 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 DEPDC4Q8N2C3 294 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 ZCCHC7Q8N3Z6 543 aaKnown RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 MIEF2Q96C03 454 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 NMD3Q96D46 503 aaKnown RBP6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 QKIQ96PU8 341 aaKnown RBP eCLIP6.36□□□□□ -1.391e-17■■■■■ 99.8
UBQLN1-206ENST00000533705 KCNS3Q9BQ31 491 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 FZD8Q9H461 694 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 NEUROD4Q9HD90 331 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 SNX10Q9Y5X0 201 aa6.36□□□□□ -1.39
UBQLN1-206ENST00000533705 IRS2Q9Y4H2 1338 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 PNMA8CA0A1B0GUJ8 204 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TRIM38O00635 465 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 SUV39H1O43463 412 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 NBNO60934 754 aa6.35□□□□□ -1.39
UBQLN1-206ENST00000533705 TM7SF2O76062 418 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms