RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 CD84Q9UIB8 345 aa13.36□□□□□ -0.27
TRAPPC4-214ENST00000533632 FKBPLQ9UIM3 349 aa13.36□□□□□ -0.27
TRAPPC4-214ENST00000533632 SMG5Q9UPR3 1016 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-214ENST00000533632 FAM169AQ9Y6X4 670 aa13.36□□□□□ -0.27
TRAPPC4-214ENST00000533632 RALGAPA1Q6GYQ0 2036 aa13.36□□□□□ -0.27
TRAPPC4-214ENST00000533632 RIF1Q5UIP0 2472 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 EP300Q09472 2414 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 A0A1W2PQU0 124 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 OR51F1A6NGY5 319 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 STX7O15400 261 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 RNGTTO60942 597 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PIAS1O75925 651 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 KRT38O76015 456 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 SEMA4FO95754 770 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 ARCN1P48444 511 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 CREB5Q02930 508 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 MGAT5Q09328 741 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PMS2CLQ68D20 193 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 MARK2Q7KZI7 788 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 CTAGE3PQ8IX95 158 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 SRRM1Q8IYB3 904 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PPM1NQ8N819 430 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PNPLA1Q8N8W4 532 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 CXorf40AQ8TE69 158 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 STYXQ8WUJ0 223 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 KLK6Q92876 244 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 SCAMP4Q969E2 229 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 SELENOSQ9BQE4 189 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 C6orf106Q9H6K1 298 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PREBQ9HCU5 417 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 RIMKLBQ9ULI2 386 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 FNDC3AQ9Y2H6 1198 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PI4KAP42356 2102 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 ZNF292O60281 2723 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 DNAH14Q0VDD8 3507 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TBC1D3DA0A087WVF3 549 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TBC1D3IA0A087WXS9 549 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TBC1D3EA0A087X179 549 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TBC1D3KA0A087X1G2 549 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 CCDC162PA2VCL2 907 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TBC1D3FA6NER0 549 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TBC1D3LB9A6J9 549 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 GOLGA8TH3BQL2 631 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PSMD11O00231 422 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PRPF4O43172 522 aaKnown RBP eCLIP13.35□□□□□ -0.272e-7■■■■□ 24.1
TRAPPC4-214ENST00000533632 RECQL5O94762 991 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 F7P08709 466 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 SNRPAP09012 282 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TBC1D3HP0C7X1 549 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PRSS56P0CW18 603 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 NFKBIAP25963 317 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 CD6P30203 668 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 MAT2AP31153 395 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 XIAPP98170 497 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 GUCY1A3Q02108 690 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 DNAJC3Q13217 504 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PEX6Q13608 980 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 LAMB3Q13751 1172 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 SIM2Q14190 667 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 EFTUD2Q15029 972 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 ACOX1Q15067 660 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 LPAL2Q16609 132 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 ZNF284Q2VY69 593 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TBC1D3GQ6DHY5 549 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TBC1D3CQ6IPX1 549 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 NLRP9Q7RTR0 991 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TBC1D3Q8IZP1 549 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 OR2T34Q8NGX1 318 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 HDAC10Q969S8 669 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 DTD2Q96FN9 168 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 CDKN2AIPNLQ96HQ2 116 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 SGK2Q9HBY8 427 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 IL26Q9NPH9 171 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 INTS9Q9NV88 658 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 SLC17A6Q9P2U8 582 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 PKP3Q9Y446 797 aa13.35□□□□□ -0.27
TRAPPC4-214ENST00000533632 TMEM120BA0PK00 339 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 VAPBO95292 243 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 IGHV4-34P06331 123 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 CHN1P15882 459 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 LSP1P33241 339 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 SFSWAPQ12872 951 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 KIAA0930Q6ICG6 404 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 FAM151BQ6UXP7 276 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 HORMAD1Q86X24 394 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 SLC41A1Q8IVJ1 513 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 MZB1Q8WU39 189 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 PEX13Q92968 403 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 CERS2Q96G23 380 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 SGSM3Q96HU1 749 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 AGAP2Q99490 1192 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 GPR174Q9BXC1 333 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 C1QTNF2Q9BXJ5 285 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 KDM4CQ9H3R0 1056 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 EBF2Q9HAK2 575 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 SMYD2Q9NRG4 433 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 NSMCE4AQ9NXX6 385 aa13.34□□□□□ -0.27
TRAPPC4-214ENST00000533632 NKIRAS1Q9NYS0 192 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms