RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 MAPK10P53779 464 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 GPLD1P80108 840 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 SQSTM1Q13501 440 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 TRA2AQ13595 282 aaKnown RBP eCLIP12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 QPCTQ16769 361 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 SLC9A4Q6AI14 798 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 CCDC70Q6NSX1 233 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 PCSK4Q6UW60 755 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 TMPRSS9Q7Z410 1059 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 TRIM74Q86UV6 250 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 NT5DC3Q86UY8 548 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 RHOT1Q8IXI2 618 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 CNTD1Q8N815 330 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 PATE1Q8WXA2 126 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 USP7Q93009 1102 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 AHCYL2Q96HN2 611 aaKnown RBP12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 SPTLC3Q9NUV7 552 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 DDX56Q9NY93 547 aaKnown RBP12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 KCNK4Q9NYG8 393 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 INTUQ9ULD6 942 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 PLEKHM1Q9Y4G2 1056 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 SPTA1P02549 2419 aa12.32□□□□□ -0.44
CAPRIN1-213ENST00000533562 PRAMEF33A0A0G2JMD5 474 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 IGHV5-10-1A0A0J9YXX1 117 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 C3orf70A6NLC5 250 aaPredicted RBP12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 PRAMEF10O60809 474 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 MFAP3LO75121 409 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 C1QL1O75973 258 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 FASLGP48023 281 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 NR2C2P49116 596 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 LIMK2P53671 638 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 ZBTB17Q13105 803 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 HENMT1Q5T8I9 393 aaKnown RBP12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 ZNF574Q6ZN55 896 aaPredicted RBP12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 CHST15Q7LFX5 561 aaPredicted RBP12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 ZNF605Q86T29 641 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 RFX6Q8HWS3 928 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 CNGA4Q8IV77 575 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 ZNF843Q8N446 348 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 SFRP1Q8N474 314 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 OR4D9Q8NGE8 314 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 IMP4Q96G21 291 aaKnown RBP12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 AGAP3Q96P47 875 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 SRPK1Q96SB4 655 aaKnown RBP12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 SLC38A3Q99624 504 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 NUDT22Q9BRQ3 303 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 SLC25A51Q9H1U9 297 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 TSPY26PQ9H489 355 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 STN1Q9H668 368 aaKnown RBP12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 ZFYVE1Q9HBF4 777 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 MAGEE1Q9HCI5 957 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 RAD18Q9NS91 495 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 CNOT6Q9ULM6 557 aaKnown RBP12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 BOD1L1Q8NFC6 3051 aa12.31□□□□□ -0.44
CAPRIN1-213ENST00000533562 TRBV23OR9-2A0A075B6M9 112 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 IGHV1OR21-1A0A087WYE8 117 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 DNAJC6O75061 913 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 KRT1P04264 644 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 SLC2A4P14672 509 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 CSTF2P33240 577 aaKnown RBP eCLIP12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 ETV5P41161 510 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 PPM1FP49593 454 aaPredicted RBP12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 CDK18Q07002 472 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 C16orf72Q14CZ0 275 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 TCEAL1Q15170 157 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 TGIF1Q15583 401 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 GLIPR1L2Q4G1C9 344 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 TEX44Q53QW1 395 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 MANEAQ5SRI9 462 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 NKAIN2Q5VXU1 208 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 TMEM71Q6P5X7 295 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 KDELC2Q7Z4H8 507 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 ZSCAN1Q8NBB4 408 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 AGBL5Q8NDL9 886 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 RCBTB1Q8NDN9 531 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 OR10G6Q8NH81 332 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 TTC9Q92623 222 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 SH3KBP1Q96B97 665 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 SGF29Q96ES7 293 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 CCDC74BQ96LY2 380 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 TAAR9Q96RI9 348 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 WDR24Q96S15 920 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 ZSCAN5AQ9BUG6 496 aa12.3□□□□□ -0.44
CAPRIN1-213ENST00000533562 OR5K4A6NMS3 321 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 FADS2P1A8MWK0 482 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 GPR89AB7ZAQ6 455 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 C9orf172C9J069 976 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 AKR1B15C9JRZ8 316 aaPredicted RBP12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 EFSO43281 561 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 GRID2O43424 1007 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 SPOPO43791 374 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 NUAK1O60285 661 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 SLC25A14O95258 325 aaPredicted RBP12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 GPR89BP0CG08 455 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 CCL4P13236 92 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 TNNT1P13805 278 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 DYNLT1P63172 113 aa12.29□□□□□ -0.44
CAPRIN1-213ENST00000533562 HHEXQ03014 270 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms