RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ATXN7L3BQ96GX2 97 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 OXNAD1Q96HP4 312 aaPredicted RBP30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 MRGPRX2Q96LB1 330 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 GFM1Q96RP9 751 aaKnown RBP30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 SPATA16Q9BXB7 569 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 POLR1BQ9H9Y6 1135 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 SPO11Q9Y5K1 396 aa30.06■■■□□ 2.4
SSSCA1-207ENST00000533115 EPOP01588 193 aa30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 ACTN2P35609 894 aa30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 TNNT3P45378 269 aaPredicted RBP30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 PDX1P52945 283 aa30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 DCDC1P59894 354 aa30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 ALS2CLQ60I27 953 aa30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 AADACL2Q6P093 401 aa30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 C17orf82Q86X59 251 aaPredicted RBP30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 CCNJLQ8IV13 435 aa30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 Q8N9G6 341 aaPredicted RBP30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 FERMT1Q9BQL6 677 aa30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 LRRN3Q9H3W5 708 aa30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 NFKBIL1Q9UBC1 381 aaPredicted RBP30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 RSPH14Q9UHP6 348 aa30.05■■■□□ 2.4
SSSCA1-207ENST00000533115 A0A087WV48 116 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 A0A1W2PQM1 296 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 DNAJC6O75061 913 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 TJP3O95049 919 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 ACTR1BP42025 376 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 MAZP56270 477 aaKnown RBP30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 ACTR1AP61163 376 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 MPP3Q13368 585 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 LRP8Q14114 963 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 TBC1D25Q3MII6 688 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 CDKL3Q8IVW4 592 aaPredicted RBP30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 LSMEM2Q8N112 164 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 UBL4BQ8N7F7 174 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 FGF11Q92914 225 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 ZSCAN5AQ9BUG6 496 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 ZNHIT2Q9UHR6 403 aa30.04■■■□□ 2.4
SSSCA1-207ENST00000533115 AURKAO14965 403 aa30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 ECEL1O95672 775 aa30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 EIF3EP60228 445 aaKnown RBP30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 SIRPB2Q5JXA9 342 aa30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 ZNF569Q5MCW4 686 aa30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 C19orf48Q6RUI8 117 aa30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 SLC25A41Q8N5S1 370 aa30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 TRAM1L1Q8N609 369 aa30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 HNRNPLLQ8WVV9 542 aaKnown RBP30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 DCBLD2Q96PD2 775 aa30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 RMI1Q9H9A7 625 aa30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 SATB2Q9UPW6 733 aa30.03■■■□□ 2.4
SSSCA1-207ENST00000533115 MIF4GDA9UHW6 222 aaKnown RBP30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 D6RAR5 112 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 DXOO77932 396 aaKnown RBP30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 RBP3P10745 1247 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 BPIP17213 487 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 C3orf38Q5JPI3 329 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 PDPK2PQ6A1A2 396 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 SPRED1Q7Z699 444 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 NAGSQ8N159 534 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 ARL14Q8N4G2 192 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 IPMKQ8NFU5 416 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 SNIP1Q8TAD8 396 aaKnown RBP30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 FAM118BQ9BPY3 351 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 GBA3Q9H227 469 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 TRABDQ9H4I3 376 aa30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 PACSIN2Q9UNF0 486 aaPredicted RBP30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 PCYT1BQ9Y5K3 369 aaPredicted RBP30.02■■■□□ 2.4
SSSCA1-207ENST00000533115 A0A1W2PNU3 283 aaPredicted RBP30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 FTCDO95954 541 aa30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 EIF2S3P41091 472 aaKnown RBP30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 CHRNA4P43681 627 aa30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 GSDMDP57764 484 aa30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 SLC1A5Q15758 541 aa30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 ITPRIPL1Q6GPH6 555 aa30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 DARS2Q6PI48 645 aaKnown RBP30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 PATE1Q8WXA2 126 aa30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 ZNF578Q96N58 590 aaPredicted RBP30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 PRKAB1Q9Y478 270 aa30.01■■■□□ 2.39
SSSCA1-207ENST00000533115 ITPR1Q14643 2758 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 RHPN2P1A8MT19 583 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 DDX3YO15523 660 aaKnown RBP30■■■□□ 2.39
SSSCA1-207ENST00000533115 SLC25A14O95258 325 aaPredicted RBP30■■■□□ 2.39
SSSCA1-207ENST00000533115 HLA-DPA1P20036 260 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 HMGCLP35914 325 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 B4GALNT1Q00973 533 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 ZNF438Q7Z4V0 828 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 FSD1LQ9BXM9 530 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 CARD9Q9H257 536 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 BPIFA1Q9NP55 256 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 ATXN10Q9UBB4 475 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 LHX6Q9UPM6 363 aa30■■■□□ 2.39
SSSCA1-207ENST00000533115 ADAMTS20P59510 1910 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 TMX2-CTNND1H3BSU7 103 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 KCNN4O15554 427 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 NUAK1O60285 661 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 ANXA9O76027 345 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 GEMP55040 296 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 ANKRD20A2Q5SQ80 823 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 ANKRD20A1Q5TYW2 823 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 ANKRD20A3Q5VUR7 823 aa29.99■■■□□ 2.39
SSSCA1-207ENST00000533115 IGF2-ASQ6U949 168 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms