RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 ANKRD20A12PQ8NF67 263 aa12.33□□□□□ -0.44
CAPN1-223ENST00000533079 THAP4Q8WY91 577 aa12.33□□□□□ -0.44
CAPN1-223ENST00000533079 SCRN2Q96FV2 425 aa12.33□□□□□ -0.44
CAPN1-223ENST00000533079 CELF6Q96J87 481 aaKnown RBP12.33□□□□□ -0.44
CAPN1-223ENST00000533079 NAP1L5Q96NT1 182 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-223ENST00000533079 MCCC1Q96RQ3 725 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-223ENST00000533079 SLC39A8Q9C0K1 460 aa12.33□□□□□ -0.44
CAPN1-223ENST00000533079 TWSG1Q9GZX9 223 aa12.33□□□□□ -0.44
CAPN1-223ENST00000533079 VPS18Q9P253 973 aa12.33□□□□□ -0.44
CAPN1-223ENST00000533079 CNOT8Q9UFF9 292 aaKnown RBP12.33□□□□□ -0.44
CAPN1-223ENST00000533079 PCDHGB7Q9Y5F8 929 aa12.33□□□□□ -0.44
CAPN1-223ENST00000533079 ITPR2Q14571 2701 aa12.33□□□□□ -0.44
CAPN1-223ENST00000533079 CELSR2Q9HCU4 2923 aa12.33□□□□□ -0.44
CAPN1-223ENST00000533079 A1L4Q6 167 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 CDC14CA4D256 554 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 SIGLEC16A6NMB1 481 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 OR5K4A6NMS3 321 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 SOD1P00441 154 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 PDGFAP04085 211 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 CCNYL3P0C7X3 344 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 RNF224P0DH78 156 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 UNGP13051 313 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 MSNP26038 577 aaKnown RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 CASP14P31944 242 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 ZNF135P52742 658 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 RIPPLY3P57055 190 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 FOXM1Q08050 763 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 NFATC2Q13469 925 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 LBRQ14739 615 aaKnown RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 TCP11X2Q5H9J9 407 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 MIIPQ5JXC2 388 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 PAPD7Q5XG87 772 aaKnown RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 DENND2CQ68D51 928 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 ZNF787Q6DD87 383 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 IYDQ6PHW0 289 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 Q6ZVL8 140 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 RAVER1Q8IY67 606 aaKnown RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 SPC24Q8NBT2 197 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 SLC30A5Q8TAD4 765 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 PDCD6IPQ8WUM4 868 aaKnown RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 SLC20A1Q8WUM9 679 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 COX14Q96I36 57 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 C9orf72Q96LT7 481 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 NUDCD1Q96RS6 583 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 TUBGCP2Q9BSJ2 902 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 CNPY3Q9BT09 278 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 ZNF768Q9H5H4 540 aaKnown RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 UCK1Q9HA47 277 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 ADAM22Q9P0K1 906 aa12.32□□□□□ -0.44
CAPN1-223ENST00000533079 RCOR3Q9P2K3 495 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 ANKRD17O75179 2603 aaKnown RBP12.32□□□□□ -0.44
CAPN1-223ENST00000533079 CRYBG3Q68DQ2 2970 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 ICE1Q9Y2F5 2266 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 A6NCN8 305 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 WIPF3A6NGB9 483 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 NPIPB15A6NHN6 443 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-223ENST00000533079 EEF2KO00418 725 aaKnown RBP12.31□□□□□ -0.44
CAPN1-223ENST00000533079 KATNA1O75449 491 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 NDUFA10O95299 355 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 F3P13726 295 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 ZNF28P17035 718 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 ZNF30P17039 623 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 ELAVL4P26378 380 aaKnown RBP12.31□□□□□ -0.44
CAPN1-223ENST00000533079 TNFRSF8P28908 595 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 TBX2Q13207 712 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-223ENST00000533079 DNASE1L3Q13609 305 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 ZNF235Q14590 738 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 UGT8Q16880 541 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.31□□□□□ -0.44
CAPN1-223ENST00000533079 PPP1R15BQ5SWA1 713 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 DNAJC24Q6P3W2 148 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 TECPR1Q7Z6L1 1165 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 PHF13Q86YI8 300 aaPredicted RBP12.31□□□□□ -0.44
CAPN1-223ENST00000533079 RASGRP3Q8IV61 690 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 LRRC8AQ8IWT6 810 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 ARHGAP12Q8IWW6 846 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 NDUFAF2Q8N183 169 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 BBS5Q8N3I7 341 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 GALNT6Q8NCL4 622 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 EXD1Q8NHP7 514 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 AP2M1Q96CW1 435 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 MCEEQ96PE7 176 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 SLC25A23Q9BV35 468 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 BRD8Q9H0E9 1235 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 RMI1Q9H9A7 625 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 MLXIPLQ9NP71 852 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 CASS4Q9NQ75 786 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 KLHL3Q9UH77 587 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 DNPEPQ9ULA0 475 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 AP4E1Q9UPM8 1137 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 PPIL1Q9Y3C6 166 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 PLEKHM1Q9Y4G2 1056 aa12.31□□□□□ -0.44
CAPN1-223ENST00000533079 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
CAPN1-223ENST00000533079 ABCA12Q86UK0 2595 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 PIPSLA2A3N6 862 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 DFFAO00273 331 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 DAPK3O43293 454 aa12.3□□□□□ -0.44
CAPN1-223ENST00000533079 KIAA0754O94854 1291 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms