RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 GPR63Q9BZJ6 419 aa12.89□□□□□ -0.35
TRAPPC4-212ENST00000533058 KLQ9UEF7 1012 aa12.89□□□□□ -0.35
TRAPPC4-212ENST00000533058 ANKRD36A6QL64 1941 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 FRYQ5TBA9 3013 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 A0A0U1RQS6 177 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 C1orf232A0A0U1RR37 186 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 LOC285095A0A1B0GVY8 99 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 RGSL1A5PLK6 1076 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 TMEM202A6NGA9 273 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 ERI2A8K979 691 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 AP2A1O95782 977 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 EPOP01588 193 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 FGF1P05230 155 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 CTSEP14091 401 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 ETV3P41162 512 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 STC1P52823 247 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 INSM1Q01101 510 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 OLIG2Q13516 323 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 C1orf61Q13536 156 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 CDKN3Q16667 212 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 DEFB133Q30KQ1 61 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 CCDC157Q569K6 752 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 LRRC66Q68CR7 880 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 LINC00523Q86TU6 105 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 TSPAN33Q86UF1 283 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 GKN2Q86XP6 184 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 HID1Q8IV36 788 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 PELI3Q8N2H9 469 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 DCBLD1Q8N8Z6 715 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 DNAAF3Q8N9W5 541 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 CCHCR1Q8TD31 782 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 BLOC1S5Q8TDH9 187 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 ZCCHC14Q8WYQ9 949 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 TSACCQ96A04 125 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 LGR4Q9BXB1 951 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 PHPT1Q9NRX4 125 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 PCYOX1Q9UHG3 505 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 ZMIZ1Q9ULJ6 1067 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 SHOC2Q9UQ13 582 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 MRFAP1Q9Y605 127 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 IGF2RP11717 2491 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 AKAP13Q12802 2813 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 USP24Q9UPU5 2620 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 GOLGA4Q13439 2230 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 LRRK1Q38SD2 2015 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 PLXNB3Q9ULL4 1909 aa12.88□□□□□ -0.35
TRAPPC4-212ENST00000533058 SPEGQ15772 3267 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 PTPRBP23467 1997 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 KMT2BQ9UMN6 2715 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 CACNA1BQ00975 2339 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 TRABD2BA6NFA1 517 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 TTI1O43156 1089 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 OPA1O60313 960 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 CLDN7O95471 211 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 ADRA1AP35348 466 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 SEMA5AQ13591 1074 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 PTK6Q13882 451 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 SEPT6Q14141 434 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 DHX34Q14147 1143 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 NR0B2Q15466 257 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 HES3Q5TGS1 186 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 CDCP2Q5VXM1 449 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 OGFOD3Q6PK18 319 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 ADAMTSL4Q6UY14 1074 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 SYDE1Q6ZW31 735 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 MAATS1Q7Z4T9 603 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 JAMLQ86YT9 394 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 WDR48Q8TAF3 677 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 OR1E3Q8WZA6 343 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 NAT6Q93015 286 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 SRPK1Q96SB4 655 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 FRMD8Q9BZ67 464 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 TRIM31Q9BZY9 425 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 NRSN2Q9GZP1 204 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 ABCG8Q9H221 673 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 CCDC86Q9H6F5 360 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 FGF22Q9HCT0 170 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 PIH1D1Q9NWS0 290 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 CLCA2Q9UQC9 943 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 SLC17A4Q9Y2C5 497 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 ZNF711Q9Y462 761 aa12.87□□□□□ -0.35
TRAPPC4-212ENST00000533058 TDRD6O60522 2096 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 PRSS38A1L453 326 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 CTAGE15A4D2H0 777 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 FAM149AA5PLN7 773 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 ZNF500O60304 480 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 MT-CO3P00414 261 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 SOD1P00441 154 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 CEACAM5P06731 702 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 CTAGE8P0CG41 777 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 TPH1P17752 444 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 PTGIRP43119 386 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 MRPS25P82663 173 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 SARNPP82979 210 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 CDK3Q00526 305 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 TARDBPQ13148 414 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 RTP5Q14D33 572 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 KCTD16Q68DU8 428 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 KCTD11Q693B1 232 aa12.86□□□□□ -0.35
TRAPPC4-212ENST00000533058 RANBP10Q6VN20 620 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms