RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 AP1B1Q10567 949 aa17.68■□□□□ 0.42
PCF11-206ENST00000533018 KDELC2Q7Z4H8 507 aa17.68■□□□□ 0.42
PCF11-206ENST00000533018 OR4D9Q8NGE8 314 aa17.68■□□□□ 0.42
PCF11-206ENST00000533018 OR8K1Q8NGG5 319 aa17.68■□□□□ 0.42
PCF11-206ENST00000533018 COX14Q96I36 57 aa17.68■□□□□ 0.42
PCF11-206ENST00000533018 RNF157Q96PX1 679 aa17.68■□□□□ 0.42
PCF11-206ENST00000533018 NENFQ9UMX5 172 aa17.68■□□□□ 0.42
PCF11-206ENST00000533018 FLNBO75369 2602 aaKnown RBP17.67■□□□□ 0.42
PCF11-206ENST00000533018 ANKRD66B4E2M5 251 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 STMND1H3BQB6 276 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 SNX2O60749 519 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 TPM1P09493 284 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 TMEM253P0C7T8 217 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 CD82P27701 267 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 HNRNPH3P31942 346 aaKnown RBP17.67■□□□□ 0.42
PCF11-206ENST00000533018 MAN1A1P33908 653 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 SPINT3P49223 89 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 TRA2AQ13595 282 aaKnown RBP eCLIP17.67■□□□□ 0.42
PCF11-206ENST00000533018 GALNT3Q14435 633 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 QPCTQ16769 361 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 FAM182AQ5T1J6 154 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 FAM129CQ86XR2 697 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 CCDC112Q8NEF3 446 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 OR10G6Q8NH81 332 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 SLC35G2Q8TBE7 412 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 TAAR9Q96RI9 348 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 LYSMD1Q96S90 227 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 DPYSL5Q9BPU6 564 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 CEP41Q9BYV8 373 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 STN1Q9H668 368 aaKnown RBP17.67■□□□□ 0.42
PCF11-206ENST00000533018 VPS18Q9P253 973 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 SDK2Q58EX2 2172 aa17.67■□□□□ 0.42
PCF11-206ENST00000533018 B8ZZF3 427 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 J3QKU1 62 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 CBFA2T2O43439 604 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 SLC4A1P02730 911 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 FGF3P11487 239 aaPredicted RBP17.66■□□□□ 0.42
PCF11-206ENST00000533018 ACP5P13686 325 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 TNNT1P13805 278 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 GPLD1P80108 840 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 PPIDQ08752 370 aaKnown RBP17.66■□□□□ 0.42
PCF11-206ENST00000533018 ZBTB17Q13105 803 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 NFATC2Q13469 925 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 TRIM14Q14142 442 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 SNAP47Q5SQN1 464 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 RAVER1Q8IY67 606 aaKnown RBP17.66■□□□□ 0.42
PCF11-206ENST00000533018 SFRP1Q8N474 314 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 AGBL5Q8NDL9 886 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 SLC37A2Q8TED4 501 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 EXTL1Q92935 676 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 ART4Q93070 314 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 SLC39A1Q9NY26 324 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 TMEM9Q9P0T7 183 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 KCNK6Q9Y257 313 aa17.66■□□□□ 0.42
PCF11-206ENST00000533018 OAS3Q9Y6K5 1087 aaKnown RBP17.66■□□□□ 0.42
PCF11-206ENST00000533018 A8MU76 341 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 FADS2P1A8MWK0 482 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 APOL1O14791 398 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 DUX1O43812 170 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 DNAJC6O75061 913 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 EML2O95834 649 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 MMP2P08253 660 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 THRAP10827 490 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 CSF2RBP32927 897 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 MAPK9P45984 424 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 DYNLT1P63172 113 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 HHEXQ03014 270 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 PCSK7Q16549 785 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 HENMT1Q5T8I9 393 aaKnown RBP17.65■□□□□ 0.42
PCF11-206ENST00000533018 ALS2CLQ60I27 953 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 TMEM71Q6P5X7 295 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 LYSMD3Q7Z3D4 306 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 DTX1Q86Y01 620 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 RFX6Q8HWS3 928 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 PLD5Q8N7P1 536 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 CCDC42Q96M95 316 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 AGAP3Q96P47 875 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 WDR24Q96S15 920 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 DNAJC7Q99615 494 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 SPATA16Q9BXB7 569 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 B3GNT4Q9C0J1 378 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 ZFYVE1Q9HBF4 777 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 ARFGAP3Q9NP61 516 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 SPTLC3Q9NUV7 552 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 TBC1D29Q9UFV1 150 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 CNOT6Q9ULM6 557 aaKnown RBP17.65■□□□□ 0.42
PCF11-206ENST00000533018 SHOC2Q9UQ13 582 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 PCDHGA4Q9Y5G9 962 aa17.65■□□□□ 0.42
PCF11-206ENST00000533018 PCYT1BQ9Y5K3 369 aaPredicted RBP17.65■□□□□ 0.42
PCF11-206ENST00000533018 SSU72P8A0A1W2PR75 194 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 RGSL1A5PLK6 1076 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 EFCAB7A8K855 629 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 KRT1P04264 644 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 PIRTP0C851 137 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 ARHGAP25P42331 645 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 FASLGP48023 281 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 ATP1A2P50993 1020 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 CYP4F2P78329 520 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 IFI35P80217 286 aaPredicted RBP17.64■□□□□ 0.41
PCF11-206ENST00000533018 PDK1Q15118 436 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms