RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 A6NL46 340 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 B9A039 149 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 NCAM2O15394 837 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 PLIN1O60240 522 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 FTCDO95954 541 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 EGFP01133 1207 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 TSHBP01222 138 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 NR3C1P04150 777 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 CEACAM1P13688 526 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 GATA2P23769 480 aaPredicted RBP3.97□□□□□ -1.77
PTPRK-220ENST00000531466 ARCN1P48444 511 aaKnown RBP3.97□□□□□ -1.77
PTPRK-220ENST00000531466 TAS2R38P59533 333 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 FOXM1Q08050 763 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 ENPP2Q13822 863 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 PPP2R5BQ15173 497 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 UGP2Q16851 508 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 CPLX2Q6PUV4 134 aaKnown RBP3.97□□□□□ -1.77
PTPRK-220ENST00000531466 ZNF704Q6ZNC4 412 aaPredicted RBP3.97□□□□□ -1.77
PTPRK-220ENST00000531466 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
PTPRK-220ENST00000531466 RUFY2Q8WXA3 655 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 TKTL2Q9H0I9 626 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 TAOK3Q9H2K8 898 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 RAD21L1Q9H4I0 556 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 FEM1BQ9UK73 627 aa3.97□□□□□ -1.77
PTPRK-220ENST00000531466 TPD52L2O43399 206 aaKnown RBP3.96□□□□□ -1.78
PTPRK-220ENST00000531466 TBX2Q13207 712 aaPredicted RBP3.96□□□□□ -1.78
PTPRK-220ENST00000531466 UBE4AQ14139 1066 aa3.96□□□□□ -1.78
PTPRK-220ENST00000531466 HIST2H2ACQ16777 129 aaPredicted RBP3.96□□□□□ -1.78
PTPRK-220ENST00000531466 SLC46A3Q7Z3Q1 461 aa3.96□□□□□ -1.78
PTPRK-220ENST00000531466 PIWIL4Q7Z3Z4 852 aaKnown RBP3.96□□□□□ -1.78
PTPRK-220ENST00000531466 MOGAT3Q86VF5 341 aa3.96□□□□□ -1.78
PTPRK-220ENST00000531466 PLD5Q8N7P1 536 aa3.96□□□□□ -1.78
PTPRK-220ENST00000531466 ZNF300Q96RE9 604 aaPredicted RBP3.96□□□□□ -1.78
PTPRK-220ENST00000531466 HEMGNQ9BXL5 484 aa3.96□□□□□ -1.78
PTPRK-220ENST00000531466 SEBOXQ9HB31 216 aaPredicted RBP3.96□□□□□ -1.78
PTPRK-220ENST00000531466 RASSF1Q9NS23 344 aa3.96□□□□□ -1.78
PTPRK-220ENST00000531466 TP53TG3Q9ULZ0 132 aa3.96□□□□□ -1.78
PTPRK-220ENST00000531466 ERVK-11Q9UQG0 969 aa3.96□□□□□ -1.78
PTPRK-220ENST00000531466 KLHL20Q9Y2M5 609 aa3.96□□□□□ -1.78
PTPRK-220ENST00000531466 DISP3Q9P2K9 1392 aa3.96□□□□□ -1.78
PTPRK-220ENST00000531466 IFNL4K9M1U5 179 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 SPINT2O43291 252 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 TFP02787 698 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 GALTP07902 379 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 DNAH10OSP0CZ25 163 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 CSF2RAP15509 400 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 COG7P83436 770 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 NAE1Q13564 534 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 POSTNQ15063 836 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 SNAI3Q3KNW1 292 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 MAP9Q49MG5 647 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 TCTEX1D4Q5JR98 221 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 ZNF774Q6NX45 483 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 SH2D5Q6ZV89 423 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 GPR180Q86V85 440 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 MAP7D3Q8IWC1 876 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 BEST3Q8N1M1 668 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 LSM14AQ8ND56 463 aaKnown RBP3.95□□□□□ -1.78
PTPRK-220ENST00000531466 GRHL3Q8TE85 626 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 POF1BQ8WVV4 589 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 EIF2AK1Q9BQI3 630 aaKnown RBP3.95□□□□□ -1.78
PTPRK-220ENST00000531466 PSD2Q9BQI7 771 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 FAM167BQ9BTA0 163 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 ANP32EQ9BTT0 268 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 NOD2Q9HC29 1040 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 TMEM181Q9P2C4 612 aa3.95□□□□□ -1.78
PTPRK-220ENST00000531466 F5H423 210 aaPredicted RBP3.94□□□□□ -1.78
PTPRK-220ENST00000531466 TACC1O75410 805 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 CNPP09543 421 aaKnown RBP3.94□□□□□ -1.78
PTPRK-220ENST00000531466 ZNF23P17027 643 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 EFNB1P98172 346 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 ANKRD1Q15327 319 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 KIAA1644Q3SXP7 199 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 FRG2Q64ET8 278 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 C1orf228Q6PIY5 440 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 MYLK4Q86YV6 388 aaPredicted RBP3.94□□□□□ -1.78
PTPRK-220ENST00000531466 SAMD3Q8N6K7 520 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 RBM15BQ8NDT2 890 aaKnown RBP3.94□□□□□ -1.78
PTPRK-220ENST00000531466 PPHLN1Q8NEY8 458 aaKnown RBP3.94□□□□□ -1.78
PTPRK-220ENST00000531466 PAGR1Q9BTK6 254 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 UBA5Q9GZZ9 404 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 PRR34Q9NV39 138 aa3.94□□□□□ -1.78
PTPRK-220ENST00000531466 EXOGQ9Y2C4 368 aaKnown RBP3.94□□□□□ -1.78
PTPRK-220ENST00000531466 LAS1LQ9Y4W2 734 aaKnown RBP3.94□□□□□ -1.78
PTPRK-220ENST00000531466 A0A1W2PPI3 338 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 TEX22C9J3V5 150 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 ACADSP16219 412 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 MSH3P20585 1137 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 MBTD1Q05BQ5 628 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 TRIM14Q14142 442 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 KIR2DS3Q14952 304 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 RALBP1Q15311 655 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 ADAMTSL4-AS1Q5T5F5 129 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 BHLHB9Q6PI77 547 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 QSOX2Q6ZRP7 698 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 HAPLN4Q86UW8 402 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 FTSJ3Q8IY81 847 aaKnown RBP3.93□□□□□ -1.78
PTPRK-220ENST00000531466 C11orf65Q8NCR3 313 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 SVIPQ8NHG7 77 aa3.93□□□□□ -1.78
PTPRK-220ENST00000531466 SLC44A1Q8WWI5 657 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms