RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TDRD12Q587J7 1177 aaKnown RBP18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 HGSNATQ68CP4 663 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 NCBP2-AS2Q69YL0 99 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 NLRP8Q86W28 1048 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 CPNE8Q86YQ8 564 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 LPCAT1Q8NF37 534 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 RTP4Q96DX8 246 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 WDR24Q96S15 920 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 NUP85Q9BW27 656 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 ADNPQ9H2P0 1102 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 TMEM63CQ9P1W3 806 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 PDP2Q9P2J9 529 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 IP6K2Q9UHH9 426 aa18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 CNOT6Q9ULM6 557 aaKnown RBP18.27■□□□□ 0.52
SSSCA1-206ENST00000531405 FADS2P1A8MWK0 482 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 NKX2-8O15522 239 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 PYGLP06737 847 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 ACP5P13686 325 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 ZNF165P49910 485 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 RAB15P59190 212 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 NIPAL4Q0D2K0 466 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 DPYSL3Q14195 570 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 CCDC122Q5T0U0 273 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 ALG1LQ6GMV1 187 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 UNC5BQ8IZJ1 945 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 ARRDC2Q8TBH0 407 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 FAM71BQ8TC56 605 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 NCSTNQ92542 709 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 MAML1Q92585 1016 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 BPIFA3Q9BQP9 254 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 APMAPQ9HDC9 416 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 RBM22Q9NW64 420 aaKnown RBP eCLIP18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 RCOR3Q9P2K3 495 aaPredicted RBP18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 KLHL3Q9UH77 587 aa18.26■□□□□ 0.51
SSSCA1-206ENST00000531405 C1orf232A0A0U1RR37 186 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 LOC101059948A0A1B0GTJ6 334 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 ZNF891A8MT65 544 aaPredicted RBP18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 MATN3O15232 486 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 SNX2O60749 519 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 HLA-DQB2P05538 268 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 PRKAR1AP10644 381 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 ARSEP51690 589 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 PAFAH1B3Q15102 231 aaKnown RBP18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 SKIDA1Q1XH10 827 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 FAM182AQ5T1J6 154 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 IYDQ6PHW0 289 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 WDR74Q6RFH5 385 aaPredicted RBP18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 TIPARPQ7Z3E1 657 aaKnown RBP18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 ARHGAP22Q7Z5H3 698 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 LRRC49Q8IUZ0 686 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 ZNF564Q8TBZ8 553 aaPredicted RBP18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 RNF31Q96EP0 1072 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 SPRY4Q9C004 299 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 GPN2Q9H9Y4 310 aaPredicted RBP18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 PCDH9Q9HC56 1237 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 ARFGAP3Q9NP61 516 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 SARS2Q9NP81 518 aaKnown RBP18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 VPS18Q9P253 973 aa18.25■□□□□ 0.51
SSSCA1-206ENST00000531405 SMTNL1A8MU46 457 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 GOLGA6L22H0YM25 854 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 CYP1A2P05177 515 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 CCR10P46092 362 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 MC2RQ01718 297 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 COLEC12Q5KU26 742 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 HENMT1Q5T8I9 393 aaKnown RBP18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 TIGD7Q6NT04 549 aaPredicted RBP18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 NLGN4XQ8N0W4 816 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 NLGN4YQ8NFZ3 816 aaPredicted RBP18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 SLC45A3Q96JT2 553 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 TEFMQ96QE5 360 aaKnown RBP18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 TBC1D10AQ9BXI6 508 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 EPN3Q9H201 632 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 DNPEPQ9ULA0 475 aa18.24■□□□□ 0.51
SSSCA1-206ENST00000531405 A0A087X0T9 212 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 A6NCN8 305 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 MBD3O95983 291 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 FAM228BP0C875 321 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 CCNCP24863 283 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 SPINT3P49223 89 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 GBE1Q04446 702 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 NR1I3Q14994 352 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 IFI16Q16666 785 aaKnown RBP18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 ANKRD20A8PQ5CZ79 823 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 ZNF648Q5T619 568 aaPredicted RBP18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 CEACAM20Q6UY09 585 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 LYSMD1Q96S90 227 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 FAM83DQ9H4H8 585 aa18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 STN1Q9H668 368 aaKnown RBP18.23■□□□□ 0.51
SSSCA1-206ENST00000531405 MYO1FO00160 1098 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 STK17BO94768 372 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 SERPINC1P01008 464 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 MMP2P08253 660 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 F3P13726 295 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 CA4P22748 312 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 CES1P23141 567 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 MAP4P27816 1152 aaKnown RBP18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 OAS2P29728 719 aaKnown RBP18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 CDC20Q12834 499 aa18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 SLC10A2Q12908 348 aaPredicted RBP18.22■□□□□ 0.51
SSSCA1-206ENST00000531405 NFKBIBQ15653 356 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms