RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 VEGFDO43915 354 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 BUB1BO60566 1050 aaPredicted RBP5.55□□□□□ -1.52
CTSB-216ENST00000530290 CPNE3O75131 537 aaKnown RBP5.55□□□□□ -1.52
CTSB-216ENST00000530290 KATNA1O75449 491 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 MTA2O94776 668 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 PDGFAP04085 211 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 CALB1P05937 261 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 GOLGA6DP0CG33 693 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 RNF224P0DH78 156 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 SLC9A1P19634 815 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 GPD1P21695 349 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 CA4P22748 312 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 MPSTP25325 297 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 CLCN1P35523 988 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 CAPZBP47756 277 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 GSDMDP57764 484 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 UBE2IP63279 158 aaKnown RBP5.55□□□□□ -1.52
CTSB-216ENST00000530290 IL10RBQ08334 325 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 PKP1Q13835 747 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 ZNF235Q14590 738 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 MAN2A1Q16706 1144 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 EIF2S3LQ2VIR3 472 aaKnown RBP5.55□□□□□ -1.52
CTSB-216ENST00000530290 CCDC14Q49A88 953 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 NADK2Q4G0N4 442 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 VWA5B1Q5TIE3 1220 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 FAM72AQ5TYM5 149 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 IZUMO3Q5VZ72 239 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 NAA35Q5VZE5 725 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 SLC6A19Q695T7 634 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 FAM72DQ6L9T8 149 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 TRNP1Q6NT89 227 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 PPP1R2P3Q6NXS1 205 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 GJB7Q6PEY0 223 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 KLHL35Q6PF15 583 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 IYDQ6PHW0 289 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 LEKR1Q6ZMV7 388 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 MED25Q71SY5 747 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 GDF7Q7Z4P5 450 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 FAM72BQ86X60 149 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 PSTKQ8IV42 348 aaKnown RBP5.55□□□□□ -1.52
CTSB-216ENST00000530290 TRIM48Q8IWZ4 208 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 CBARPQ8N350 705 aaPredicted RBP5.55□□□□□ -1.52
CTSB-216ENST00000530290 TSEN2Q8NCE0 465 aaKnown RBP5.55□□□□□ -1.52
CTSB-216ENST00000530290 C3orf20Q8ND61 904 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 EXD1Q8NHP7 514 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 EPS8L1Q8TE68 723 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 CT55Q8WUE5 264 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 MARVELD3Q96A59 401 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 AP2M1Q96CW1 435 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 SCRN2Q96FV2 425 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 COX14Q96I36 57 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 LRFN5Q96NI6 719 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 OR6C1Q96RD1 312 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 CD180Q99467 661 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 SMAD5Q99717 465 aaKnown RBP5.55□□□□□ -1.52
CTSB-216ENST00000530290 SUDS3Q9H7L9 328 aaPredicted RBP5.55□□□□□ -1.52
CTSB-216ENST00000530290 LATS2Q9NRM7 1088 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 AGPAT4Q9NRZ5 378 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 GOLGA6AQ9NYA3 693 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 SEMA5BQ9P283 1151 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 CPNE7Q9UBL6 633 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 EPHA6Q9UF33 1036 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 DNAJC12Q9UKB3 198 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 MAN1B1Q9UKM7 699 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 RARRES3Q9UL19 164 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 PPIL1Q9Y3C6 166 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 HIVEP1P15822 2718 aa5.55□□□□□ -1.52
CTSB-216ENST00000530290 CELSR1Q9NYQ6 3014 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 RGSL1A5PLK6 1076 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 A8MU76 341 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 PPP1R3GB7ZBB8 358 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 FOXN3O00409 490 aaPredicted RBP5.54□□□□□ -1.52
CTSB-216ENST00000530290 CREB3O43889 395 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 SPAG6O75602 509 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 RASSF9O75901 435 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 DNAJB5O75953 348 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 UBXN7O94888 489 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 CBX6O95503 412 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 SOD1P00441 154 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 CYP1A1P04798 512 aaPredicted RBP5.54□□□□□ -1.52
CTSB-216ENST00000530290 FURINP09958 794 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 RAB40ALP0C0E4 278 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 KRT3P12035 628 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 CD44P16070 742 aaKnown RBP5.54□□□□□ -1.52
CTSB-216ENST00000530290 ZNF28P17035 718 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 AMD1P17707 334 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 XRCC1P18887 633 aaPredicted RBP5.54□□□□□ -1.52
CTSB-216ENST00000530290 ETV3P41162 512 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 NSFP46459 744 aaKnown RBP5.54□□□□□ -1.52
CTSB-216ENST00000530290 SCNN1BP51168 640 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 ZNF143P52747 638 aaPredicted RBP5.54□□□□□ -1.52
CTSB-216ENST00000530290 ITGA1P56199 1179 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 MRPL49Q13405 166 aaKnown RBP5.54□□□□□ -1.52
CTSB-216ENST00000530290 NFATC2Q13469 925 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 ZXDCQ2QGD7 858 aaPredicted RBP5.54□□□□□ -1.52
CTSB-216ENST00000530290 C15orf59Q2T9L4 293 aaPredicted RBP5.54□□□□□ -1.52
CTSB-216ENST00000530290 ARMC12Q5T9G4 340 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 LYPLAL1Q5VWZ2 237 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 PDPK2PQ6A1A2 396 aa5.54□□□□□ -1.52
CTSB-216ENST00000530290 IGFL3Q6UXB1 125 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms