RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 ZNF234Q14588 700 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 POLD3Q15054 466 aaPredicted RBP8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 USP39Q53GS9 565 aaKnown RBP8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 ARHGAP36Q6ZRI8 547 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 CCDC117Q8IWD4 279 aaPredicted RBP8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 RCOR2Q8IZ40 523 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 SLC35F6Q8N357 371 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 ALLCQ8N6M5 410 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 KDM1BQ8NB78 822 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 RPLP0P6Q8NHW5 317 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 UBE2Q2Q8WVN8 375 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 VOPP1Q96AW1 172 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 SGSM3Q96HU1 749 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 OLFM3Q96PB7 478 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 ALS2CR12Q96Q35 445 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 POLR3BQ9NW08 1133 aaPredicted RBP8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 ERVW-1Q9UQF0 538 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 HS3ST2Q9Y278 367 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 ACTL7AQ9Y615 435 aa8.88□□□□□ -0.99
CCDC90B-217ENST00000530253 A0A1W2PQF6 199 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 A0A1W2PQU0 124 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 WASH3PC4AMC7 463 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 APOL1O14791 398 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 NCAM2O15394 837 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 TIMM44O43615 452 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 KDELR3O43731 214 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 DLX3O60479 287 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 PRAMEF11O60813 436 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 ZNF821O75541 412 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 PAPSS2O95340 614 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 KLF8O95600 359 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 MT-CO1P00395 513 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 SRPRAP08240 638 aaKnown RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 SRCP12931 536 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 TDGF1P13385 188 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 PECAM1P16284 738 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 POLR2EP19388 210 aaKnown RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 SERPINB6P35237 376 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 ETFBP38117 255 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 PAPOLAP51003 745 aaKnown RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 ECT2LQ008S8 904 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 SULT2A1Q06520 285 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 MTAPQ13126 283 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 KLF1Q13351 362 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 LLGL1Q15334 1064 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 C2orf27AQ580R0 203 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 TFDP3Q5H9I0 405 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 NPNTQ6UXI9 565 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 LINGO4Q6UY18 593 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 BBS12Q6ZW61 710 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 RFX6Q8HWS3 928 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 MAML2Q8IZL2 1156 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 SPEM1Q8N4L4 309 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 UBL4BQ8N7F7 174 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 AMER2Q8N7J2 671 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 ATOH1Q92858 354 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 ZNF419Q96HQ0 510 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 RPL10LQ96L21 214 aaKnown RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 CARD9Q9H257 536 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 PRDM16Q9HAZ2 1276 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 PRMT8Q9NR22 394 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 DONSONQ9NYP3 566 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 SLCO3A1Q9UIG8 710 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 MMP17Q9ULZ9 603 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 ZKSCAN5Q9Y2L8 839 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 STON1Q9Y6Q2 735 aa8.87□□□□□ -0.99
CCDC90B-217ENST00000530253 TCRBV7S2A1N4TA0A589 114 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 ARHGAP42A6NI28 874 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 TTC34A8MYJ7 566 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 J3KR12 359 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 K7ERQ8 282 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 K7ESF4 209 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 CBX4O00257 560 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 NPC1O15118 1278 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 SMAD6O43541 496 aaKnown RBP8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 KIF5CO60282 957 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 CST8O60676 142 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 ATP1A1P05023 1023 aaKnown RBP8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 ATP5BP06576 529 aaKnown RBP8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 HLA-EP13747 358 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 TGM2P21980 687 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 NTSR1P30989 418 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 WASP42768 502 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 SERPINH1P50454 418 aaKnown RBP8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 DNA2P51530 1060 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 DYNLT1P63172 113 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 SATB1Q01826 763 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 IL10RBQ08334 325 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 RPS6KA1Q15418 735 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 HNRNPA1L2Q32P51 320 aaKnown RBP8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 ZNF569Q5MCW4 686 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 KAZNQ674X7 775 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 IL31Q6EBC2 164 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 C22orf39Q6P5X5 142 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 LEKR1Q6ZMV7 388 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 SYT13Q7L8C5 426 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 TRMT11Q7Z4G4 463 aaKnown RBP8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 CCDC50Q8IVM0 306 aa8.86□□□□□ -0.99
CCDC90B-217ENST00000530253 SH2D3CQ8N5H7 860 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms