RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 H0YIN7 160 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 M0QZ24 198 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 CELF2O95319 508 aaKnown RBP6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 CHRNB1P11230 501 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 CHRNB2P17787 502 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 PROZP22891 400 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 DNASE1P24855 282 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 PIGAP37287 484 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 CAPZA1P52907 286 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 ADORA2A-AS1P86434 159 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 PPP2R2BQ00005 443 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 NFE2L1Q14494 772 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 ZNF674Q2M3X9 581 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 FAM98BQ52LJ0 330 aaKnown RBP6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 TEX38Q6PEX7 206 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 OLFML1Q6UWY5 402 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 CCDC190Q86UF4 302 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 CCAR2Q8N163 923 aaKnown RBP6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 GALNT16Q8N428 558 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 ARL10Q8N8L6 244 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 SEMA6DQ8NFY4 1073 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 OR1J2Q8NGS2 313 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 HM13Q8TCT9 377 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 CCDC114Q96M63 670 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 DDOQ99489 341 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 WDR77Q9BQA1 342 aaPredicted RBP6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 KCNN2Q9H2S1 579 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 NOL11Q9H8H0 719 aaKnown RBP6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 TRPV4Q9HBA0 871 aa6.4□□□□□ -1.38
CAPRIN1-208ENST00000530008 TMEM8BA6NDV4 472 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 OR6C76A6NM76 312 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 CCDC188H7C350 402 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 FMO6PO60774 539 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 CREG1O75629 220 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 G6PDP11413 515 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 PFKFB1P16118 471 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 DDX5P17844 614 aaKnown RBP6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 ACHEP22303 614 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 EIF2S3P41091 472 aaKnown RBP6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 HNF4AP41235 474 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 BMXP51813 675 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 PTK6Q13882 451 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 TUBB2AQ13885 445 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 EIF2S3LQ2VIR3 472 aaKnown RBP6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 ATP13A5Q4VNC0 1218 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 IYDQ6PHW0 289 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 PPP1R21Q6ZMI0 780 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 ZNF782Q6ZMW2 699 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 GET4Q7L5D6 327 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 UNC45BQ8IWX7 931 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 FBXO39Q8N4B4 442 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 NAT8LQ8N9F0 302 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 TMEM163Q8TC26 289 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 MGARPQ8TDB4 240 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 TAS1R2Q8TE23 839 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 SPACA9Q96E40 222 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 SIGLEC11Q96RL6 698 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 FERMT1Q9BQL6 677 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 ABHD6Q9BV23 337 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 TUBB2BQ9BVA1 445 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 CHMP1AQ9HD42 196 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 DDX43Q9NXZ2 648 aaKnown RBP6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 COQ3Q9NZJ6 369 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 STK39Q9UEW8 545 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 INSL6Q9Y581 213 aa6.39□□□□□ -1.39
CAPRIN1-208ENST00000530008 A0A1W2PPC1 479 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 TLX3O43711 291 aaPredicted RBP6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 STX6O43752 255 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 PROP1O75360 226 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 KCNK5O95279 499 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 LINGO3P0C6S8 592 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 SP100P23497 879 aaPredicted RBP6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 NR2F2P24468 414 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 RAD23BP54727 409 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 YWHAHQ04917 246 aaPredicted RBP6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 ST3GAL1Q11201 340 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 PPIGQ13427 754 aaKnown RBP eCLIP6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 DUSP6Q16828 381 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 ZRANB3Q5FWF4 1079 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 NSUN5P2Q63ZY6 315 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 KRT39Q6A163 491 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 PAPD4Q6PIY7 484 aaKnown RBP6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 ZNF66Q6ZN08 573 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 SIX6OS1Q8N1H7 587 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 AFAP1Q8N556 730 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 GRK7Q8WTQ7 553 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 APBB2Q92870 758 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 ZFYVE19Q96K21 471 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 ZNF558Q96NG5 402 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 GFM1Q96RP9 751 aaKnown RBP6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 SH3GL2Q99962 352 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 TASP1Q9H6P5 420 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 MMP25Q9NPA2 562 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 MSRB1Q9NZV6 116 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 ACSL5Q9ULC5 683 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 TTC7AQ9ULT0 858 aaPredicted RBP6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 ZNF541Q9H0D2 1346 aa6.38□□□□□ -1.39
CAPRIN1-208ENST00000530008 A0A0B4J293 547 aa6.37□□□□□ -1.39
CAPRIN1-208ENST00000530008 LRRC3CA6NJW4 275 aa6.37□□□□□ -1.39
CAPRIN1-208ENST00000530008 EIF4E1BA6NMX2 242 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms