RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 SH3BP2P78314 561 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 MYLK3Q32MK0 819 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 PITRM1Q5JRX3 1037 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 HMBOX1Q6NT76 420 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 RETREG3Q86VR2 466 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 CHERPQ8IWX8 916 aaKnown RBP15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 EXT2Q93063 718 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 IGSF8Q969P0 613 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 ZFRQ96KR1 1074 aaKnown RBP15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 ZNF597Q96LX8 424 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 ERVK-6Q9BXR3 956 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 AKTIPQ9H8T0 292 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 RNF11Q9Y3C5 154 aa15.72■□□□□ 0.11
TM9SF1-208ENST00000529332 LOC285095A0A1B0GVY8 99 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 LCHNA4D1U4 455 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 LRRC14BA6NHZ5 514 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 SRP72O76094 671 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 ADH1AP07327 375 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 ZDHHC11BP0C7U3 371 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 FDXRP22570 491 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 SLC7A1P30825 629 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 ETFBP38117 255 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 ATP4BP51164 291 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 CLCN2P51788 898 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 SLC7A2P52569 658 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 EPHB3P54753 998 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 NFKB2Q00653 900 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 SEMA3AQ14563 771 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 MTX3Q5HYI7 312 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 C10orf120Q5SQS8 335 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 KLHDC10Q6PID8 442 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 HACD2Q6Y1H2 254 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 AMIGO2Q86SJ2 522 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 ZNF354CQ86Y25 554 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 DUS3LQ96G46 650 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 LRCH3Q96II8 777 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 SLC29A1Q99808 456 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 EMILIN2Q9BXX0 1053 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 GIMAP2Q9UG22 337 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 DNAJC15Q9Y5T4 150 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 CDK14O94921 469 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 SIX3O95343 332 aaPredicted RBP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 CXCL14O95715 111 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 TBX18O95935 607 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 ACADVLP49748 655 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 UBE3AQ05086 875 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 EFEMP1Q12805 493 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 OR4D1Q15615 310 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 SAMD4BQ5PRF9 694 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 IL31Q6EBC2 164 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 CIR1Q86X95 450 aaPredicted RBP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 ZFP28Q8NHY6 868 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 FAM110BQ8TC76 370 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 TRMT2BQ96GJ1 504 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 DNAJC1Q96KC8 554 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 ZNF512Q96ME7 567 aaPredicted RBP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 UHRF1Q96T88 793 aaPredicted RBP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 MARCH2Q9P0N8 246 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 CNOT6Q9ULM6 557 aaKnown RBP15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 INSL5Q9Y5Q6 135 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 SNX13Q9Y5W8 968 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 ARL5AQ9Y689 179 aa15.71■□□□□ 0.11
TM9SF1-208ENST00000529332 IGLV3-10A0A075B6K4 115 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 LINC01553A4QN01 128 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 H0YJX3 145 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 GOT2P00505 430 aaKnown RBP15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 CNPP09543 421 aaKnown RBP15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 PSMC3P17980 439 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 KPNA1P52294 538 aaPredicted RBP15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 FOXA1P55317 472 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 NME5P56597 212 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 TNK2Q07912 1038 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 FBXL22Q6P050 247 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 ITIH5Q86UX2 942 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 CLYBLQ8N0X4 340 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 RYBPQ8N488 228 aaPredicted RBP15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 PTGR2Q8N8N7 351 aaPredicted RBP15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 MPP4Q96JB8 637 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 MYRFLQ96LU7 910 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 TCF25Q9BQ70 676 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 UBXN8O00124 270 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 MUSKO15146 869 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 TLR5O60602 858 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 PPP3CCP48454 512 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 TXNL4AP83876 142 aaKnown RBP15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 ACVR1Q04771 509 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 TWF1Q12792 350 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 MTA1Q13330 715 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 TRIP4Q15650 581 aaPredicted RBP15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 RAP1GAP2Q684P5 730 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 NSUN5Q96P11 429 aaKnown RBP15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 CIB1Q99828 191 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 NOL11Q9H8H0 719 aaKnown RBP15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 PTTG2Q9NZH5 202 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 TRPM5Q9NZQ8 1165 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 MAP10Q9P2G4 905 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 IRAK3Q9Y616 596 aa15.7■□□□□ 0.1
TM9SF1-208ENST00000529332 CCDC162PA2VCL2 907 aa15.69■□□□□ 0.1
TM9SF1-208ENST00000529332 ANKRD33BA6NCL7 494 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms