RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 TBC1D3DA0A087WVF3 549 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TBC1D3IA0A087WXS9 549 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TBC1D3EA0A087X179 549 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TBC1D3KA0A087X1G2 549 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TTC24A2A3L6 582 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TBC1D3FA6NER0 549 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 FAM47DPA6NHR8 397 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 LRRC72A6NJI9 287 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ENO4A6NNW6 628 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TBC1D3LB9A6J9 549 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 APOC4-APOC2K7ER74 178 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 KCNK1O00180 336 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TRAFD1O14545 582 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 CASQ2O14958 399 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ZSCAN12O43309 604 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 AP1G1O43747 822 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 GJB3O75712 270 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TJP3O95049 919 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 JCHAINP01591 159 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 APOC2P02655 101 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC4A1P02730 911 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 UGT2B4P06133 528 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TBC1D3HP0C7X1 549 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF806P0C7X5 589 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 SFTPCP11686 197 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ADRB3P13945 408 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TIMP2P16035 220 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ENDOUP21128 410 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ITPKAP23677 461 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 GRK2P25098 689 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 MAOBP27338 520 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ATP5DP30049 168 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 GCKP35557 465 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC19A1P41440 591 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 CCR5P51681 352 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ADPRHP54922 357 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 MAXP61244 160 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 AP1S1P61966 158 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 GABREP78334 506 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 IFI35P80217 286 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 SKOR1P84550 965 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 CREB5Q02930 508 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 BCL2L1Q07817 233 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 AP1B1Q10567 949 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 XRCC4Q13426 336 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 SNX1Q13596 522 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 PDE1CQ14123 709 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF235Q14590 738 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 RPS6KA1Q15418 735 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TEX44Q53QW1 395 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 DCAF12L1Q5VU92 463 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 PEAR1Q5VY43 1037 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 LYSMD4Q5XG99 296 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 KIAA0895LQ68EN5 471 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TBC1D3GQ6DHY5 549 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TBC1D3CQ6IPX1 549 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 PLBD1Q6P4A8 553 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 VHLLQ6RSH7 139 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 NANOGNBQ7Z5D8 188 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TTC7BQ86TV6 843 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ALYREFQ86V81 257 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 CAMK1DQ8IU85 385 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 SYT12Q8IV01 421 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TBC1D3Q8IZP1 549 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 NKAIN3Q8N8D7 197 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 KIF18AQ8NI77 898 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TFB1MQ8WVM0 346 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 RAB7BQ96AH8 199 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ECHDC3Q96DC8 303 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 HSPA12BQ96MM6 686 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ALS2CR12Q96Q35 445 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TTC1Q99614 292 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TLR10Q9BXR5 811 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 TRIM4Q9C037 500 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 POLR1EQ9GZS1 481 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ATP13A3Q9H7F0 1226 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 EBF2Q9HAK2 575 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 NOD2Q9HC29 1040 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 PREBQ9HCU5 417 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 NT5MQ9NPB1 228 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 NCDNQ9UBB6 729 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 PHTF1Q9UMS5 762 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 PCDHB14Q9Y5E9 798 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 FADS3Q9Y5Q0 445 aa6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 NYNRINQ9P2P1 1898 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-209ENST00000529214 A0A1W2PPC4 97 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 A0A1W2PQ67 120 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 TSPAN11A1L157 253 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 FAM187AA6NFU0 413 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 HACD1B0YJ81 288 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 AREL1O15033 823 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 TTI1O43156 1089 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 HTRA2O43464 458 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 LATO43561 262 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 LRP3O75074 770 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 PIGNO95427 931 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 IGHV4-34P06331 123 aa6.28□□□□□ -1.4
ATPAF1-209ENST00000529214 CD27P26842 260 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms