RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 SIX1Q15475 284 aaPredicted RBP17.21■□□□□ 0.35
USP35-202ENST00000528910 P3H1Q32P28 736 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 PYCR3Q53H96 274 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 ZDHHC20Q5W0Z9 365 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 KCTD11Q693B1 232 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 OGFOD3Q6PK18 319 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 GLT6D1Q7Z4J2 308 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 TAF8Q7Z7C8 310 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 NRROSQ86YC3 692 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 DCBLD1Q8N8Z6 715 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 PDLIM2Q96JY6 352 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 TMEM121Q9BTD3 319 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 SPATA16Q9BXB7 569 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 RMI1Q9H9A7 625 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 IL17CQ9P0M4 197 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 PADI4Q9UM07 663 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 TMEM98Q9Y2Y6 226 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 ST14Q9Y5Y6 855 aa17.21■□□□□ 0.35
USP35-202ENST00000528910 USP24Q9UPU5 2620 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 AGTP01019 485 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 MSLNQ13421 630 aaPredicted RBP17.2■□□□□ 0.34
USP35-202ENST00000528910 LRP8Q14114 963 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 PARP6Q2NL67 630 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 PERM1Q5SV97 790 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 ARHGEF18Q6ZSZ5 1173 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 C17orf82Q86X59 251 aaPredicted RBP17.2■□□□□ 0.34
USP35-202ENST00000528910 GALNT13Q8IUC8 556 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 KDF1Q8NAX2 398 aaPredicted RBP17.2■□□□□ 0.34
USP35-202ENST00000528910 BLOC1S5Q8TDH9 187 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 GLYATL1Q969I3 302 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 VPS35Q96QK1 796 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 KCNF1Q9H3M0 494 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 ARNT2Q9HBZ2 717 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 SIRPGQ9P1W8 387 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 FEZ2Q9UHY8 353 aaPredicted RBP17.2■□□□□ 0.34
USP35-202ENST00000528910 CLCA2Q9UQC9 943 aa17.2■□□□□ 0.34
USP35-202ENST00000528910 CPED1A4D0V7 1026 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 GPR89AB7ZAQ6 455 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 PPFIA2O75334 1257 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 METTL18O95568 372 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 CAPNS1P04632 268 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 ATP1A1P05023 1023 aaKnown RBP17.19■□□□□ 0.34
USP35-202ENST00000528910 GPR89BP0CG08 455 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 AK4P27144 223 aaPredicted RBP17.19■□□□□ 0.34
USP35-202ENST00000528910 SPAM1P38567 509 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 CTBSQ01459 385 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 OLIG2Q13516 323 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 HLTFQ14527 1009 aaKnown RBP eCLIP17.19■□□□□ 0.34
USP35-202ENST00000528910 C14orf28Q4W4Y0 310 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 CERCAMQ5T4B2 595 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 DENND5AQ6IQ26 1287 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 MARCH9Q86YJ5 346 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 PHYKPLQ8IUZ5 450 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 FAM46DQ8NEK8 389 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 OR6C4Q8NGE1 309 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 MAPK15Q8TD08 544 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 TBL1YQ9BQ87 522 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 SUDS3Q9H7L9 328 aaPredicted RBP17.19■□□□□ 0.34
USP35-202ENST00000528910 TAAR2Q9P1P5 351 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 PCYT1BQ9Y5K3 369 aaPredicted RBP17.19■□□□□ 0.34
USP35-202ENST00000528910 EPG5Q9HCE0 2579 aa17.19■□□□□ 0.34
USP35-202ENST00000528910 B4DGG1 531 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 GAPDHSO14556 408 aaPredicted RBP17.18■□□□□ 0.34
USP35-202ENST00000528910 MT-CO3P00414 261 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 JUPP14923 745 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 STIP1P31948 543 aaKnown RBP17.18■□□□□ 0.34
USP35-202ENST00000528910 PEX6Q13608 980 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 TAF1AQ15573 450 aaPredicted RBP17.18■□□□□ 0.34
USP35-202ENST00000528910 DRICH1Q6PGQ1 229 aaPredicted RBP17.18■□□□□ 0.34
USP35-202ENST00000528910 MARK2Q7KZI7 788 aaKnown RBP17.18■□□□□ 0.34
USP35-202ENST00000528910 SFTPA2Q8IWL1 248 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 WDR48Q8TAF3 677 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 CCDC74AQ96AQ1 378 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 LRRC45Q96CN5 670 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 C19orf43Q9BQ61 176 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 APOL2Q9BQE5 337 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 CCDC3Q9BQI4 270 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 BPIFA1Q9NP55 256 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 IL26Q9NPH9 171 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 SPATS2LQ9NUQ6 558 aaKnown RBP17.18■□□□□ 0.34
USP35-202ENST00000528910 SMOXQ9NWM0 555 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.18■□□□□ 0.34
USP35-202ENST00000528910 ATXN10Q9UBB4 475 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 GULP1Q9UBP9 304 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 DKK4Q9UBT3 224 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 TMPRSS11EQ9UL52 423 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 ZKSCAN5Q9Y2L8 839 aa17.18■□□□□ 0.34
USP35-202ENST00000528910 CHUKO15111 745 aa17.17■□□□□ 0.34
USP35-202ENST00000528910 NUAK1O60285 661 aa17.17■□□□□ 0.34
USP35-202ENST00000528910 TCEA3O75764 348 aa17.17■□□□□ 0.34
USP35-202ENST00000528910 SLC25A14O95258 325 aaPredicted RBP17.17■□□□□ 0.34
USP35-202ENST00000528910 ASMTLO95671 621 aa17.17■□□□□ 0.34
USP35-202ENST00000528910 AP2A1O95782 977 aa17.17■□□□□ 0.34
USP35-202ENST00000528910 PNLIPP16233 465 aa17.17■□□□□ 0.34
USP35-202ENST00000528910 GLB1P16278 677 aa17.17■□□□□ 0.34
USP35-202ENST00000528910 ACTR1BP42025 376 aa17.17■□□□□ 0.34
USP35-202ENST00000528910 ACTR1AP61163 376 aa17.17■□□□□ 0.34
USP35-202ENST00000528910 TARDBPQ13148 414 aaKnown RBP eCLIP17.17■□□□□ 0.34
USP35-202ENST00000528910 SLC30A9Q6PML9 568 aa17.17■□□□□ 0.34
USP35-202ENST00000528910 ZNF438Q7Z4V0 828 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms