RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ADRA1AP35348 466 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 LEPRP48357 1165 aaKnown RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 SERPINH1P50454 418 aaKnown RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 CCT8P50990 548 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 MAXP61244 160 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 GALNT1Q10472 559 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 ATP6AP1Q15904 470 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 ZIK1Q3SY52 487 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 OGFOD2Q6N063 350 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 TAF2Q6P1X5 1199 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 LIMS2Q7Z4I7 341 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 ZNF280BQ86YH2 543 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 DQX1Q8TE96 717 aaKnown RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 DPF3Q92784 378 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 PLEKHA8Q96JA3 519 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 UBXN10Q96LJ8 280 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 MYRFLQ96LU7 910 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 KCNA7Q96RP8 456 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 KCTD14Q9BQ13 255 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 GPATCH1Q9BRR8 931 aaKnown RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 CATSPERBQ9H7T0 1116 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 MRM3Q9HC36 420 aaKnown RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 H3BMM5 538 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 GABRDO14764 452 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 BAIAP3O94812 1187 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 RASAL1O95294 804 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 SNAP29O95721 258 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 LBPP18428 481 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 CD247P20963 164 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 CES1P23141 567 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 RPS9P46781 194 aaKnown RBP12.46□□□□□ -0.42
CAPN1-208ENST00000527323 FOXA1P55317 472 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 RABL3Q5HYI8 236 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 TMEM207Q6UWW9 146 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 MINDY1Q8N5J2 469 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 VPS33AQ96AX1 596 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.42
CAPN1-208ENST00000527323 NT5MQ9NPB1 228 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 CD320Q9NPF0 282 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 RGS18Q9NS28 235 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 MPP6Q9NZW5 540 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 NUDT5Q9UKK9 219 aa12.46□□□□□ -0.42
CAPN1-208ENST00000527323 J3QRK9 145 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 SNAP91O60641 907 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 B3GAT3O94766 335 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 CDK14O94921 469 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 LDLRP01130 860 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 OR4Q2P0C623 313 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 FCGR1AP12314 374 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 HSD17B1P14061 328 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 ZNF182P17025 639 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-208ENST00000527323 MAGEA8P43361 318 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 HERVK_113P63132 956 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 ZNF33AQ06730 810 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 FBXO48Q5FWF7 155 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 LCN8Q6JVE9 175 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 PDZD8Q8NEN9 1154 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 ZNF420Q8TAQ5 688 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-208ENST00000527323 TBC1D15Q8TC07 691 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 ADAMTS16Q8TE57 1224 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 FBXL8Q96CD0 374 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 FCRL2Q96LA5 508 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-208ENST00000527323 ERVK-6Q9BXR3 956 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 ING2Q9H160 280 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 ANAPC2Q9UJX6 822 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 COQ6Q9Y2Z9 468 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 Q9Y3F1 56 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 UBXN8O00124 270 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 PAGE1O75459 146 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 ALBP02768 609 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 BDNFP23560 247 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 VARSP26640 1264 aaKnown RBP12.45□□□□□ -0.42
CAPN1-208ENST00000527323 AXLP30530 894 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 LHX1P48742 406 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 UGT3A2Q3SY77 523 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 IRAK1BP1Q5VVH5 260 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 CILP2Q8IUL8 1156 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 PTERQ96BW5 349 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 NSUN5Q96P11 429 aaKnown RBP12.45□□□□□ -0.42
CAPN1-208ENST00000527323 ALG2Q9H553 416 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 PFDN4Q9NQP4 134 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 SELENONQ9NZV5 590 aa12.45□□□□□ -0.42
CAPN1-208ENST00000527323 TTC24A2A3L6 582 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-208ENST00000527323 TRIM64CA6NLI5 447 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 GPIP06744 558 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 CD86P42081 329 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 GSK3BP49841 420 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 KCNK10P57789 538 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 LIPEQ05469 1076 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 TRIM60Q495X7 471 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 TIGD7Q6NT04 549 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-208ENST00000527323 TERB1Q8NA31 727 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 SH3RF2Q8TEC5 729 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 PABPC5Q96DU9 382 aaKnown RBP12.44□□□□□ -0.42
CAPN1-208ENST00000527323 SMARCD1Q96GM5 515 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 PAWRQ96IZ0 340 aaKnown RBP12.44□□□□□ -0.42
CAPN1-208ENST00000527323 RNF145Q96MT1 663 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 PPP1R2P1Q96PQ5 205 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 IFT80Q9P2H3 777 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms