RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 KIAA0754O94854 1291 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 PGLSO95336 258 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 ATP1A1P05023 1023 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 ANKRD34CP0C6C1 535 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 ACP5P13686 325 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 COL8A1P27658 744 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 HSPA9P38646 679 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 MAXP61244 160 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 SH3BP2P78314 561 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 SYCP1Q15431 976 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 NADK2Q4G0N4 442 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 ARMC12Q5T9G4 340 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 LRRC66Q68CR7 880 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 RASGRP3Q8IV61 690 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 COX14Q96I36 57 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 C9orf72Q96LT7 481 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 SMIM14Q96QK8 99 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 OR6C1Q96RD1 312 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 PEBP4Q96S96 227 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 SNRNP25Q9BV90 132 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 TRIM55Q9BYV6 548 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 EPB41L1Q9H4G0 881 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 CASS4Q9NQ75 786 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 SAMSN1Q9NSI8 373 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 CUEDC1Q9NWM3 386 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 PCSK1NQ9UHG2 260 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 LNPEPQ9UIQ6 1025 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 KCND3Q9UK17 655 aa12.88□□□□□ -0.35
CLNS1A-207ENST00000527133 DOPEY1Q5JWR5 2465 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 TNRC6AQ8NDV7 1962 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 A6NCN8 305 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 EIF3CLB5ME19 914 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 DNAJC6O75061 913 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 CREG1O75629 220 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 NDUFA10O95299 355 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 PEX11BO96011 259 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 PSMA2P25787 234 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 CASP14P31944 242 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 SEPHS1P49903 392 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 PGDP52209 483 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 DNASE1L3Q13609 305 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 DPCR1Q3MIW9 517 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 TCP11X2Q5H9J9 407 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 ERMARDQ5T6L9 678 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 LYSMD3Q7Z3D4 306 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 APLFQ8IW19 511 aaPredicted RBP12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 EXD1Q8NHP7 514 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 TGM7Q96PF1 710 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 EIF3CQ99613 913 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 MGME1Q9BQP7 344 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 HERPUD2Q9BSE4 406 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 RIOK2Q9BVS4 552 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 CPNE7Q9UBL6 633 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 MAP4K5Q9Y4K4 846 aa12.87□□□□□ -0.35
CLNS1A-207ENST00000527133 SHANK1Q9Y566 2161 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 HIVEP3Q5T1R4 2406 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 KIR2DS5A0A0G2JLQ3 304 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 A0A0G2JNG1 304 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 LILRA5A6NI73 299 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 KIR2DS3K7RE56 304 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 C9P02748 559 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 PYGLP06737 847 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 PDHA1P08559 390 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 CCNYL3P0C7X3 344 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 F3P13726 295 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 SLC2A4P14672 509 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 TYRP1P17643 537 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 GARSP41250 739 aaKnown RBP12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 PTSQ03393 145 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 SEMA5AQ13591 1074 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 DPYSQ14117 519 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 IL11RAQ14626 422 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 KIR2DS5Q14953 304 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 EIF2S3LQ2VIR3 472 aaKnown RBP12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 ZNF765Q7L2R6 523 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 BBS5Q8N3I7 341 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 ARFGAP1Q8N6T3 406 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 CT55Q8WUE5 264 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 PIH1D2Q8WWB5 315 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 OGFRQ9NZT2 677 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 CWC15Q9P013 229 aaKnown RBP12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 VPS18Q9P253 973 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 PADI1Q9ULC6 663 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 PPIL1Q9Y3C6 166 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 PCDHGA6Q9Y5G7 932 aa12.86□□□□□ -0.35
CLNS1A-207ENST00000527133 RASSF9O75901 435 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 DDAH2O95865 285 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 EEF1GP26641 437 aaKnown RBP12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 DCTP40126 519 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 LEPRP48357 1165 aaKnown RBP12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 STC1P52823 247 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 CHAF1BQ13112 559 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 MRPL49Q13405 166 aaKnown RBP12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 PRR30Q53SZ7 412 aaPredicted RBP12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 CPZQ66K79 652 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 MAMDC2Q7Z304 686 aaPredicted RBP12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 NLRP8Q86W28 1048 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 MCOLN2Q8IZK6 566 aa12.85□□□□□ -0.35
CLNS1A-207ENST00000527133 NDUFAF2Q8N183 169 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms