RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 MED16Q9Y2X0 877 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 PCDHB7Q9Y5E2 793 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 SPO11Q9Y5K1 396 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 SNX13Q9Y5W8 968 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 ZFP37Q9Y6Q3 630 aaPredicted RBP10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 TANC1Q9C0D5 1861 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 ILVBLA1L0T0 632 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 LRRC14BA6NHZ5 514 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 H3BNC9 293 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 VPS26AO75436 327 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 ECI2O75521 394 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 CRCPO75575 148 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 MLYCDO95822 493 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 BMP2P12643 396 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 HGFP14210 728 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 LPOP22079 712 aaPredicted RBP10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 TTPAP49638 278 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 SCNN1BP51168 640 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 LSAMPQ13449 338 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 APOFQ13790 326 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 GRB7Q14451 532 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 INPP5AQ14642 412 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 KLHDC10Q6PID8 442 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 BLOC1S3Q6QNY0 202 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 RSPO2Q6UXX9 243 aaPredicted RBP10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 CYP2R1Q6VVX0 501 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 PDZD8Q8NEN9 1154 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 OVCA2Q8WZ82 227 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 B3GALT6Q96L58 329 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 CCT7Q99832 543 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 SEMA6AQ9H2E6 1030 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 MUC13Q9H3R2 512 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 SCUBE2Q9NQ36 999 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 CCM2LQ9NUG4 571 aaPredicted RBP10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 TMEM45AQ9NWC5 275 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 APPL1Q9UKG1 709 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 FAM50BQ9Y247 325 aa10.74□□□□□ -0.69
PTPMT1-204ENST00000527079 TYW5A2RUC4 315 aaKnown RBP10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 NME4O00746 187 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 HNRNPRO43390 633 aaKnown RBP10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 CSPG5O95196 566 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 ESRRBO95718 433 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 CHEK2O96017 543 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PRR35P0CG20 571 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 CAPN3P20807 821 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 GRIA3P42263 894 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 NR1H2P55055 460 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 TSNQ15631 228 aaKnown RBP10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 NRF1Q16656 503 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 EML3Q32P44 896 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 C11orf91Q3C1V1 193 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 VPS26BQ4G0F5 336 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 MTX3Q5HYI7 312 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 LCN8Q6JVE9 175 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 CHST9Q7L1S5 443 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 ERMP1Q7Z2K6 904 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 SLC15A3Q8IY34 581 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PACRGLQ8N7B6 248 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 MDGA1Q8NFP4 955 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 GIPC2Q8TF65 315 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 FUBP1Q96AE4 644 aaKnown RBP10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PPWD1Q96BP3 646 aaKnown RBP10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 BIRC8Q96P09 236 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 CASD1Q96PB1 797 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 KCNA7Q96RP8 456 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PRPF18Q99633 342 aaKnown RBP10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 GPR21Q99679 349 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 SLC39A3Q9BRY0 314 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 SPON2Q9BUD6 331 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 ADGRE3Q9BY15 652 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 TRIM54Q9BYV2 358 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 NACA2Q9H009 215 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 ACTR3BQ9P1U1 418 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PCDHGB4Q9UN71 923 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PCDHGB5Q9Y5G0 923 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 COMMD10Q9Y6G5 202 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 C7orf72A4D263 438 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 ALDH1A1P00352 501 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 RHOCP08134 193 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 LINC00032P0C843 101 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PRSS56P0CW18 603 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 UROSP10746 265 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PKMP14618 531 aaKnown RBP10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 ELNP15502 786 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 ATF6P18850 670 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 RGRP47804 291 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 SLC11A1P49279 550 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 CLCN4P51793 760 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 MAP7Q14244 749 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PTPRNQ16849 979 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 SLC5A9Q2M3M2 681 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 RTP2Q5QGT7 225 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 HMBOX1Q6NT76 420 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PPP4R4Q6NUP7 873 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 BORAQ6PGQ7 559 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 IYDQ6PHW0 289 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 FAM43BQ6ZT52 329 aaPredicted RBP10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 ALDH16A1Q8IZ83 802 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 SLC43A3Q8NBI5 491 aa10.73□□□□□ -0.69
PTPMT1-204ENST00000527079 PLD4Q96BZ4 506 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms