RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 BTRCQ9Y297 605 aa17.48■□□□□ 0.39
USH1C-205ENST00000527020 C15orf38-AP3S2A0A0A6YYH1 394 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 A0A1B0GVM2 712 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 TCRBV3S1A0A5B6 114 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 NPEPPSL1A6NEC2 478 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 C2orf81A6NN90 581 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 HOXA2O43364 376 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 LPOP22079 712 aaPredicted RBP17.47■□□□□ 0.39
USH1C-205ENST00000527020 HOXD10P28358 340 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 TUFMP49411 452 aaKnown RBP17.47■□□□□ 0.39
USH1C-205ENST00000527020 SLC7A2P52569 658 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 ATP6V0D1P61421 351 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 ECT2LQ008S8 904 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 CTSL3PQ5NE16 218 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 ADGRF1Q5T601 910 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 LINGO4Q6UY18 593 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 ARPINQ7Z6K5 226 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 ST13P4Q8IZP2 240 aaPredicted RBP17.47■□□□□ 0.39
USH1C-205ENST00000527020 SEMA4BQ9NPR2 832 aaPredicted RBP17.47■□□□□ 0.39
USH1C-205ENST00000527020 MICAL3Q7RTP6 2002 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 C2orf78A6NCI8 922 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 ANKRD66B4E2M5 251 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 NR5A2O00482 541 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 KLK8O60259 260 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 SNAP91O60641 907 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 NIPSNAP2O75323 286 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 LINC00032P0C843 101 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 IRF1P10914 325 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 CAPN3P20807 821 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 AGTR2P50052 363 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 CDKL1Q00532 357 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 GEN1Q17RS7 908 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 KIF19Q2TAC6 998 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 PITRM1Q5JRX3 1037 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 SAMD4BQ5PRF9 694 aaKnown RBP17.47■□□□□ 0.39
USH1C-205ENST00000527020 DDIASQ8IXT1 998 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 RNF168Q8IYW5 571 aaPredicted RBP17.47■□□□□ 0.39
USH1C-205ENST00000527020 TTC30BQ8N4P2 665 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 DUS3LQ96G46 650 aaKnown RBP17.47■□□□□ 0.39
USH1C-205ENST00000527020 KLF16Q9BXK1 252 aaPredicted RBP17.47■□□□□ 0.39
USH1C-205ENST00000527020 CCDC68Q9H2F9 335 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 HMX1Q9NP08 348 aaPredicted RBP17.47■□□□□ 0.39
USH1C-205ENST00000527020 ZNF225Q9UK10 706 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 AP4B1Q9Y6B7 739 aa17.47■□□□□ 0.39
USH1C-205ENST00000527020 C9JVG2 144 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 SMIM18P0DKX4 95 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 PKMP14618 531 aaKnown RBP17.46■□□□□ 0.39
USH1C-205ENST00000527020 PRDX3P30048 256 aaKnown RBP17.46■□□□□ 0.39
USH1C-205ENST00000527020 MC4RP32245 332 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 NOGQ13253 232 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 LIN52Q52LA3 116 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 SIDT2Q8NBJ9 832 aaKnown RBP17.46■□□□□ 0.39
USH1C-205ENST00000527020 ROPN1LQ96C74 230 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 CLSTN3Q9BQT9 956 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 C1QTNF3Q9BXJ4 246 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 BPIFA1Q9NP55 256 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 SLC52A3Q9NQ40 469 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 AP4S1Q9Y587 144 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 BACE2Q9Y5Z0 518 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 BBIP1A8MTZ0 92 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 FXYD1O00168 92 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 AHCYL1O43865 530 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 TMCC1O94876 653 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 ZNF26P17031 533 aaPredicted RBP17.46■□□□□ 0.39
USH1C-205ENST00000527020 CES1P23141 567 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 HK3P52790 923 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 GK3PQ14409 553 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 USP41Q3LFD5 358 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 ANKS6Q68DC2 871 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 CYP2R1Q6VVX0 501 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 LRRC43Q8N309 656 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 EFHBQ8N7U6 833 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 CD200R1Q8TD46 325 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 ZNF483Q8TF39 744 aaPredicted RBP17.46■□□□□ 0.39
USH1C-205ENST00000527020 SLC45A3Q96JT2 553 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 MYRFLQ96LU7 910 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 MUC3BQ9H195 1237 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 SDR39U1Q9NRG7 319 aaPredicted RBP17.46■□□□□ 0.39
USH1C-205ENST00000527020 LHX3Q9UBR4 397 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 TIMM22Q9Y584 194 aa17.46■□□□□ 0.39
USH1C-205ENST00000527020 OBSL1O75147 1896 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 BTN3A1O00481 513 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 NME4O00746 187 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 STX16O14662 325 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 MATN4O95460 622 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 PRR35P0CG20 571 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 LBPP18428 481 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 YBX1P67809 324 aaKnown RBP17.45■□□□□ 0.38
USH1C-205ENST00000527020 VPS26BQ4G0F5 336 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 UGT3A1Q6NUS8 523 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 NCEH1Q6PIU2 408 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 SYVN1Q86TM6 617 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 MIER2Q8N344 545 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 GALNT4Q8N4A0 578 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 NKAPQ8N5F7 415 aaKnown RBP17.45■□□□□ 0.38
USH1C-205ENST00000527020 PIP4K2CQ8TBX8 421 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 LRTOMTQ8WZ04 291 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 TUBGCP3Q96CW5 907 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 SCLYQ96I15 445 aa17.45■□□□□ 0.38
USH1C-205ENST00000527020 TRPM5Q9NZQ8 1165 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms