RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 GID8Q9NWU2 228 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 PLXNA4Q9HCM2 1894 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 KPNA6O60684 536 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 PRR35P0CG20 571 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 IDO1P14902 403 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 PBX3P40426 434 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 ECT2LQ008S8 904 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 ILF2Q12905 390 aaKnown RBP11.6□□□□□ -0.55
LINC01001-201ENST00000526704 LPIN1Q14693 890 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 PARP15Q460N3 678 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 SPRED1Q7Z699 444 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 KLHDC9Q8NEP7 349 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 KIAA1191Q96A73 305 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 TEX37Q96LM6 180 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 MUC3BQ9H195 1237 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 SEMA4BQ9NPR2 832 aaPredicted RBP11.6□□□□□ -0.55
LINC01001-201ENST00000526704 TCRBV5S2A0A599 114 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 GLTPD2A6NH11 291 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 DRGXA6NNA5 263 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 ACOX3O15254 700 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 PRAMEF11O60813 436 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 ECI2O75521 394 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 RPS17P08708 135 aaKnown RBP11.6□□□□□ -0.55
LINC01001-201ENST00000526704 MTHFD1P11586 935 aaKnown RBP11.6□□□□□ -0.55
LINC01001-201ENST00000526704 IL10P22301 178 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 FASP25445 335 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 GSK3BP49841 420 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 RCAN2Q14206 197 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 ZNF235Q14590 738 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 TRIP4Q15650 581 aaPredicted RBP11.6□□□□□ -0.55
LINC01001-201ENST00000526704 SLC36A3Q495N2 470 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 OGFOD2Q6N063 350 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 PAQR3Q6TCH7 311 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 ZNF598Q86UK7 904 aaKnown RBP11.6□□□□□ -0.55
LINC01001-201ENST00000526704 MIB1Q86YT6 1006 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 DCP1BQ8IZD4 617 aaKnown RBP11.6□□□□□ -0.55
LINC01001-201ENST00000526704 FBXO39Q8N4B4 442 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 TTC9BQ8N6N2 239 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 BRSK1Q8TDC3 778 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 GPR152Q8TDT2 470 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 VPS33AQ96AX1 596 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 CENPNQ96H22 339 aaPredicted RBP11.6□□□□□ -0.55
LINC01001-201ENST00000526704 C8orf48Q96LL4 319 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 TRIM54Q9BYV2 358 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 DERL2Q9GZP9 239 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 FBXO44Q9H4M3 255 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 PDFQ9HBH1 243 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 TUBA8Q9NY65 449 aaPredicted RBP11.6□□□□□ -0.55
LINC01001-201ENST00000526704 RNF112Q9ULX5 631 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 OAZ3Q9UMX2 235 aa11.6□□□□□ -0.55
LINC01001-201ENST00000526704 HEMK1Q9Y5R4 338 aaPredicted RBP11.6□□□□□ -0.55
LINC01001-201ENST00000526704 UBA6A0AVT1 1052 aaPredicted RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 TRIM64A6NGJ6 449 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 ZSCAN9O15535 394 aaPredicted RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 RHOBTB1O94844 696 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 RASAL1O95294 804 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 HMBSP08397 361 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 PRDX3P30048 256 aaKnown RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 MRPL19P49406 292 aaKnown RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 ZNF140P52738 457 aaPredicted RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 FKBP1BP68106 108 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 MERTKQ12866 999 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 TSNQ15631 228 aaKnown RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 RABL3Q5HYI8 236 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 ZNF786Q8N393 782 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 TNIP2Q8NFZ5 429 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 RPRD1AQ96P16 312 aaPredicted RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 TRIB3Q96RU7 358 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 C9orf16Q9BUW7 83 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 INTS10Q9NVR2 710 aaKnown RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 AIG1Q9NVV5 245 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 RIMKLBQ9ULI2 386 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 TIMM22Q9Y584 194 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 OAS3Q9Y6K5 1087 aaKnown RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 A0A1W2PP18 115 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 CDC7O00311 574 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 VPS4BO75351 444 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 GPIP06744 558 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 CTBSQ01459 385 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 DCTN2Q13561 401 aaKnown RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 RPS6KA2Q15349 733 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 SPATS1Q496A3 300 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 XKR7Q5GH72 579 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 PAGE3Q5JUK9 113 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 SYVN1Q86TM6 617 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 PTRH1Q86Y79 214 aaKnown RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 ZNF280BQ86YH2 543 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 STAG3L4Q8TBR4 150 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 CDKN2AIPNLQ96HQ2 116 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 FUBP3Q96I24 572 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 FBXL20Q96IG2 436 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 RPL10LQ96L21 214 aaKnown RBP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 NSMCE3Q96MG7 304 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 BIRC8Q96P09 236 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 ALG2Q9H553 416 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC01001-201ENST00000526704 ZNF225Q9UK10 706 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 FAM50BQ9Y247 325 aa11.59□□□□□ -0.55
LINC01001-201ENST00000526704 SPO11Q9Y5K1 396 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms