RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TIGD7Q6NT04 549 aaPredicted RBP10.92□□□□□ -0.66
NEDD8-204ENST00000526430 DRICH1Q6PGQ1 229 aaPredicted RBP10.92□□□□□ -0.66
NEDD8-204ENST00000526430 MAMDC2Q7Z304 686 aaPredicted RBP10.92□□□□□ -0.66
NEDD8-204ENST00000526430 SRLQ86TD4 932 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 PRUNE1Q86TP1 453 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 KLHDC8BQ8IXV7 354 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 ZNF567Q8N184 647 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 GALNT11Q8NCW6 608 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 GPBAR1Q8TDU6 330 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 LMX1AQ8TE12 382 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 TFB1MQ8WVM0 346 aaKnown RBP10.92□□□□□ -0.66
NEDD8-204ENST00000526430 BTN2A2Q8WVV5 523 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 ECHDC3Q96DC8 303 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 HEPHQ9BQS7 1158 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 FOXP3Q9BZS1 431 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 NOD2Q9HC29 1040 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 NT5MQ9NPB1 228 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 KLF15Q9UIH9 416 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 PADI4Q9UM07 663 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 NEU2Q9Y3R4 380 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 NAV3Q8IVL0 2385 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 LMO7DNF2Z398 122 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 STMND1H3BQB6 276 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 HTRA2O43464 458 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-204ENST00000526430 BNIP3LO60238 219 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 FZD6O60353 706 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 ETS1P14921 441 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 JUNDP17535 347 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 TCP1P17987 556 aaKnown RBP10.91□□□□□ -0.66
NEDD8-204ENST00000526430 ITIH2P19823 946 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 ITIH1P19827 911 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 CETN2P41208 172 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 RABIFP47224 123 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 KCNJ1P48048 391 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 ATP1A2P50993 1020 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 RENBPP51606 427 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 CCDC15Q0P6D6 951 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 LONRF2Q1L5Z9 754 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 LACTB2Q53H82 288 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-204ENST00000526430 ESRP1Q6NXG1 681 aaKnown RBP10.91□□□□□ -0.66
NEDD8-204ENST00000526430 BZW1Q7L1Q6 419 aaKnown RBP10.91□□□□□ -0.66
NEDD8-204ENST00000526430 CAMK1DQ8IU85 385 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 TTC13Q8NBP0 860 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 KLK6Q92876 244 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 RTP4Q96DX8 246 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 BMFQ96LC9 184 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 C16orf45Q96MC5 204 aaPredicted RBP10.91□□□□□ -0.66
NEDD8-204ENST00000526430 NUDCD1Q96RS6 583 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 TMEM121Q9BTD3 319 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 AP1M1Q9BXS5 423 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 SPASTQ9UBP0 616 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 IL36AQ9UHA7 158 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 AMACRQ9UHK6 382 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 DRG1Q9Y295 367 aaKnown RBP10.91□□□□□ -0.66
NEDD8-204ENST00000526430 SAR1BQ9Y6B6 198 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 MTORP42345 2549 aa10.91□□□□□ -0.66
NEDD8-204ENST00000526430 A0A1W2PQM1 296 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 TSPAN11A1L157 253 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 A1L4Q6 167 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 CTAGE9A4FU28 777 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 POM121BA6NF01 834 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 C5orf60A6NFR6 353 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 PRR19A6NJB7 356 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 H7C0C1 242 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 PPP1R12AO14974 1030 aaPredicted RBP10.9□□□□□ -0.66
NEDD8-204ENST00000526430 VPS4BO75351 444 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 GCATO75600 419 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 PIGNO95427 931 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 PRKCGP05129 697 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 PDHA1P08559 390 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 RNF224P0DH78 156 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 TIMP2P16035 220 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 ETV5P41161 510 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 ATP5OP48047 213 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 SCNN1BP51168 640 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 SNRPD1P62314 119 aaKnown RBP10.9□□□□□ -0.66
NEDD8-204ENST00000526430 ZFP36L1Q07352 338 aaKnown RBP10.9□□□□□ -0.66
NEDD8-204ENST00000526430 TRAF2Q12933 501 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 SNX1Q13596 522 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 PTPRRQ15256 657 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 ANKRD20A2Q5SQ80 823 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 ANKRD20A1Q5TYW2 823 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 TMEM164Q5U3C3 297 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 ANKRD20A3Q5VUR7 823 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 ZSCAN30Q86W11 494 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 SPOCK2Q92563 424 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 USP7Q93009 1102 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 NKD1Q969G9 470 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 TRIM44Q96DX7 344 aaPredicted RBP10.9□□□□□ -0.66
NEDD8-204ENST00000526430 IMP4Q96G21 291 aaKnown RBP10.9□□□□□ -0.66
NEDD8-204ENST00000526430 ABHD17AQ96GS6 310 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 GDAP1L1Q96MZ0 367 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 AGAP3Q96P47 875 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 SMIM14Q96QK8 99 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 TRIB3Q96RU7 358 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 CMKLR1Q99788 373 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 MLPHQ9BV36 600 aaPredicted RBP10.9□□□□□ -0.66
NEDD8-204ENST00000526430 CINPQ9BW66 212 aaPredicted RBP10.9□□□□□ -0.66
NEDD8-204ENST00000526430 CDH19Q9H159 772 aa10.9□□□□□ -0.66
NEDD8-204ENST00000526430 SUV39H2Q9H5I1 410 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms