RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TP73O15350 636 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 OR1I1O60431 355 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SNX2O60749 519 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PIAS2O75928 621 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SRP72O76094 671 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 VAPBO95292 243 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 EML2O95834 649 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TNFP01375 233 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SYPP08247 313 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CTAGE8P0CG41 777 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 MYCLP1P12525 358 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 ACP5P13686 325 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CD59P13987 128 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CTSEP14091 401 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TSHRP16473 764 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF8P17098 575 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 ITGB6P18564 788 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TPSB2P20231 275 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 DGKAP23743 735 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 ADRA1DP25100 572 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 NFKBIAP25963 317 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 HTR1BP28222 390 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 EPHA8P29322 1005 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 AKT1P31749 480 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 HOXD12P35452 270 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TRIM23P36406 574 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 RABIFP47224 123 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CTSCP53634 463 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PLTPP55058 493 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 GUCY2DQ02846 1103 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PPARDQ03181 441 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CKAP4Q07065 602 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 DPTQ07507 201 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 DHX9Q08211 1270 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 DNAJC3Q13217 504 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 DHX34Q14147 1143 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 BRD3Q15059 726 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 AGERQ15109 404 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TPSAB1Q15661 275 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SEPT7Q16181 437 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 WHAMMP3Q1A5X7 153 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF423Q2M1K9 1284 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PCID2Q5JVF3 399 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TEX35Q5T0J7 233 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 UBAP2Q5T6F2 1119 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 GPRC6AQ5T6X5 926 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 DUPD1Q68J44 220 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 HIBCHQ6NVY1 386 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 C8orf74Q6P047 294 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 LRRC8BQ6P9F7 803 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC30A9Q6PML9 568 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 ADAMTSL4Q6UY14 1074 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 MACC1Q6ZN28 852 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CHST15Q7LFX5 561 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 ADGRG6Q86SQ4 1221 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CTAGE6Q86UF2 777 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PARGQ86W56 976 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CCDC25Q86WR0 208 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 MARCH9Q86YJ5 346 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CTAGE4Q8IX94 777 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 GSPT2Q8IYD1 628 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PIANPQ8IYJ0 282 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 NRSN1Q8IZ57 195 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC25A45Q8N413 288 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TRAM1L1Q8N609 369 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CLDN19Q8N6F1 224 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 OTUD6BQ8N6M0 293 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 RASGEF1AQ8N9B8 481 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 DENND6BQ8NEG7 585 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PPHLN1Q8NEY8 458 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 OR13J1Q8NGT2 312 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 RHBDD1Q8TEB9 315 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 BTN2A2Q8WVV5 523 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PATE1Q8WXA2 126 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 IFT81Q8WYA0 676 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SLCO2A1Q92959 643 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 GLYATL1Q969I3 302 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SKA1Q96BD8 255 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF669Q96BR6 464 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 FAM136AQ96C01 138 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 LRRC45Q96CN5 670 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 MFSD3Q96ES6 412 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SGF29Q96ES7 293 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SNF8Q96H20 258 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CDKN2AIPNLQ96HQ2 116 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 HIC2Q96JB3 615 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SERPINB12Q96P63 405 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PPP1R2P1Q96PQ5 205 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 WDR83Q9BRX9 315 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 ERP44Q9BS26 406 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 LRRC61Q9BV99 259 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 FRMD8Q9BZ67 464 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TRABDQ9H4I3 376 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 EPB41L5Q9HCM4 733 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 EIF2B3Q9NR50 452 aaKnown RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PHPT1Q9NRX4 125 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 GPR27Q9NS67 375 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 NLE1Q9NVX2 485 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 GRHL1Q9NZI5 618 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 HACD3Q9P035 362 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms