RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 FCRL3Q96P31 734 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-223ENST00000523125 DPH1Q9BZG8 443 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 RBSNQ9H1K0 784 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 SEMA6CQ9H3T2 930 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 ZFYVE1Q9HBF4 777 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 RDH14Q9HBH5 336 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 MAGEE1Q9HCI5 957 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 PKD2L2Q9NZM6 624 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 VPS18Q9P253 973 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 PRKAB1Q9Y478 270 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 hCG_1818297A0A087WSY0 165 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 KLK10O43240 276 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 ZRANB2O95218 330 aaKnown RBP eCLIP12.27□□□□□ -0.454e-17■■□□□ 11.4
VEGFA-223ENST00000523125 ASMTLO95671 621 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 HGFP14210 728 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 CD1CP29017 333 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 ALDH4A1P30038 563 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 GPR3P46089 330 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 EIF3IQ13347 325 aaKnown RBP12.27□□□□□ -0.45
VEGFA-223ENST00000523125 PCSK7Q16549 785 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 C11orf63Q6NUN7 778 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 USP53Q70EK8 1073 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 BZW1Q7L1Q6 419 aaKnown RBP12.27□□□□□ -0.45
VEGFA-223ENST00000523125 GPR155Q7Z3F1 870 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 GALNT13Q8IUC8 556 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 RCOR2Q8IZ40 523 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 CCHCR1Q8TD31 782 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 TFB1MQ8WVM0 346 aaKnown RBP12.27□□□□□ -0.45
VEGFA-223ENST00000523125 MRFAP1L1Q96HT8 127 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 PANX2Q96RD6 677 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 STRADBQ9C0K7 418 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 CPNE5Q9HCH3 593 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 NFKBIL1Q9UBC1 381 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-223ENST00000523125 ZNHIT2Q9UHR6 403 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 SHOC2Q9UQ13 582 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 REXO2Q9Y3B8 237 aaKnown RBP12.27□□□□□ -0.45
VEGFA-223ENST00000523125 SPO11Q9Y5K1 396 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 EPN1Q9Y6I3 576 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-223ENST00000523125 DUSP10Q9Y6W6 482 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 SDK2Q58EX2 2172 aa12.27□□□□□ -0.45
VEGFA-223ENST00000523125 AHCTF1Q8WYP5 2266 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 LOC285095A0A1B0GVY8 99 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 SOWAHDA6NJG2 315 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 RHPN2P1A8MT19 583 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 AURKAO14965 403 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 PMPCBO75439 489 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 NDUFA10O95299 355 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 CPNE6O95741 557 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 NDST3O95803 873 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 NFKB1P19838 968 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 SLC5A2P31639 672 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 ETV5P41161 510 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 DCDC1P59894 354 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 CXADRP78310 365 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 CFHR1Q03591 330 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 SQSTM1Q13501 440 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 PEX6Q13608 980 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 LRP8Q14114 963 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 C16orf72Q14CZ0 275 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 SPA17Q15506 151 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 AMZ1Q400G9 498 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 KDELC1Q6UW63 502 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 CHST15Q7LFX5 561 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-223ENST00000523125 PIM3Q86V86 326 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 ZC3H18Q86VM9 953 aaKnown RBP12.26□□□□□ -0.45
VEGFA-223ENST00000523125 ZNF567Q8N184 647 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 SLC37A2Q8TED4 501 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 P3H4Q92791 437 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 UBL7Q96S82 380 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-223ENST00000523125 NUDT22Q9BRQ3 303 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 HERPUD2Q9BSE4 406 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 RMI1Q9H9A7 625 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 ARFGAP3Q9NP61 516 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 UBP1Q9NZI7 540 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 ATXN10Q9UBB4 475 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 TBC1D29Q9UFV1 150 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 ZNF711Q9Y462 761 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 LOXL2Q9Y4K0 774 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 PCDHGA7Q9Y5G6 932 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 ADGRG1Q9Y653 693 aa12.26□□□□□ -0.45
VEGFA-223ENST00000523125 BAHCC1Q9P281 2608 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 CFAP46Q8IYW2 2715 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 TRBV23OR9-2A0A075B6M9 112 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 IGHV1OR21-1A0A087WYE8 117 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 IGHV5-10-1A0A0J9YXX1 117 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 A6NCN8 305 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 AGRPO00253 132 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 NUAK1O60285 661 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 BPIP17213 487 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 ITIH1P19827 911 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 CYLC1P35663 651 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-223ENST00000523125 FASLGP48023 281 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 WNT3AP56704 352 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 CLN3Q13286 438 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 COL9A2Q14055 689 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-223ENST00000523125 NOMO1Q15155 1222 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 PPP2R5EQ16537 467 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 CLPPQ16740 277 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-223ENST00000523125 MAP9Q49MG5 647 aa12.25□□□□□ -0.45
VEGFA-223ENST00000523125 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms