RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 MAGEE1Q9HCI5 957 aa18.55■□□□□ 0.56
SPIDR-220ENST00000522900 ARFGAP3Q9NP61 516 aa18.55■□□□□ 0.56
SPIDR-220ENST00000522900 THSD1Q9NS62 852 aa18.55■□□□□ 0.56
SPIDR-220ENST00000522900 ZNHIT2Q9UHR6 403 aa18.55■□□□□ 0.56
SPIDR-220ENST00000522900 SPO11Q9Y5K1 396 aa18.55■□□□□ 0.56
SPIDR-220ENST00000522900 FAM208BQ5VWN6 2430 aa18.55■□□□□ 0.56
SPIDR-220ENST00000522900 RGSL1A5PLK6 1076 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 RHPN2P1A8MT19 583 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 CDRT15L2A8MXV6 281 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 F5H423 210 aaPredicted RBP18.54■□□□□ 0.56
SPIDR-220ENST00000522900 AURKAO14965 403 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 PPM1DO15297 605 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 EML2O95834 649 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 SLC4A1P02730 911 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 HGFP14210 728 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 NFKB1P19838 968 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 ALDH4A1P30038 563 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 ZFP36L1Q07352 338 aaKnown RBP18.54■□□□□ 0.56
SPIDR-220ENST00000522900 NOMO1Q15155 1222 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 AMZ1Q400G9 498 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 USP53Q70EK8 1073 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 RAB11FIP2Q7L804 512 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 ZNF438Q7Z4V0 828 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 GALNT13Q8IUC8 556 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 TMTC1Q8IUR5 882 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 LACRTQ9GZZ8 138 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 CDH19Q9H159 772 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 SEMA6CQ9H3T2 930 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 RDH14Q9HBH5 336 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 ZNF711Q9Y462 761 aa18.54■□□□□ 0.56
SPIDR-220ENST00000522900 NDST3O95803 873 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 CCKBRP32239 447 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 UGT1A5P35504 534 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 SLC14A2Q15849 920 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 KDELC1Q6UW63 502 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 CHST15Q7LFX5 561 aaPredicted RBP18.53■□□□□ 0.56
SPIDR-220ENST00000522900 ZNF567Q8N184 647 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 FBXO39Q8N4B4 442 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 ACRBPQ8NEB7 543 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 TMEM74Q96NL1 305 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 GPR63Q9BZJ6 419 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 VPS18Q9P253 973 aa18.53■□□□□ 0.56
SPIDR-220ENST00000522900 LOC285095A0A1B0GVY8 99 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 PLD2O14939 933 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 KLK10O43240 276 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 CD1CP29017 333 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 WNT3AP56704 352 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 NR1D2Q14995 579 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 NKAIN2Q5VXU1 208 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 ZNF574Q6ZN55 896 aaPredicted RBP18.52■□□□□ 0.56
SPIDR-220ENST00000522900 BBS12Q6ZW61 710 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 PID1Q7Z2X4 250 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 SLITRK4Q8IW52 837 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 KCNE4Q8WWG9 221 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 OXNAD1Q96HP4 312 aaPredicted RBP18.52■□□□□ 0.56
SPIDR-220ENST00000522900 RBM41Q96IZ5 413 aaKnown RBP18.52■□□□□ 0.56
SPIDR-220ENST00000522900 NUDT22Q9BRQ3 303 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 SPATA16Q9BXB7 569 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 STRADBQ9C0K7 418 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 LUC7LQ9NQ29 371 aaKnown RBP18.52■□□□□ 0.56
SPIDR-220ENST00000522900 ATXN10Q9UBB4 475 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 FAM153AQ9UHL3 310 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.52■□□□□ 0.56
SPIDR-220ENST00000522900 PCDHA3Q9Y5H8 950 aa18.52■□□□□ 0.56
SPIDR-220ENST00000522900 TMX2-CTNND1H3BSU7 103 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 ZNF8P17098 575 aaPredicted RBP18.51■□□□□ 0.55
SPIDR-220ENST00000522900 BPIP17213 487 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 CTNNA1P35221 906 aaKnown RBP18.51■□□□□ 0.55
SPIDR-220ENST00000522900 CHRNA4P43681 627 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 NAP1L1P55209 391 aaKnown RBP18.51■□□□□ 0.55
SPIDR-220ENST00000522900 LRP8Q14114 963 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 PPP2R5EQ16537 467 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 CCDC70Q6NSX1 233 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 CLEC14AQ86T13 490 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 HTR3CQ8WXA8 447 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 FCRL3Q96P31 734 aaPredicted RBP18.51■□□□□ 0.55
SPIDR-220ENST00000522900 QKIQ96PU8 341 aaKnown RBP eCLIP18.51■□□□□ 0.556e-7■■□□□ 13.3
SPIDR-220ENST00000522900 BPIFA1Q9NP55 256 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 KLHL8Q9P2G9 620 aaPredicted RBP18.51■□□□□ 0.55
SPIDR-220ENST00000522900 TBC1D29Q9UFV1 150 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 KCNK6Q9Y257 313 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 LOXL2Q9Y4K0 774 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 LOC400499M0QZD8 3231 aa18.51■□□□□ 0.55
SPIDR-220ENST00000522900 A0A0U1RQJ8 604 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 MTSS1O43312 755 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 NUAK1O60285 661 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 SLC25A14O95258 325 aaPredicted RBP18.5■□□□□ 0.55
SPIDR-220ENST00000522900 ITGA2BP08514 1039 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 ACP5P13686 325 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 ITIH1P19827 911 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 RBL1P28749 1068 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 ETV5P41161 510 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 CXADRP78310 365 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 CFHR1Q03591 330 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 BIRC2Q13490 618 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 PEX6Q13608 980 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 MAP9Q49MG5 647 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 SIRPB2Q5JXA9 342 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 PHF19Q5T6S3 580 aa18.5■□□□□ 0.55
SPIDR-220ENST00000522900 AADACL2Q6P093 401 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms