RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ATXN7L2Q5T6C5 722 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-220ENST00000522658 MEI1Q5TIA1 1274 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 TAF3Q5VWG9 929 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 LEKR1Q6ZMV7 388 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 KDELC2Q7Z4H8 507 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 SPRED1Q7Z699 444 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 ZFAND4Q86XD8 727 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 FAM129CQ86XR2 697 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 DNAAF5Q86Y56 855 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 FAM114A1Q8IWE2 563 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 OR56A4Q8NGH8 313 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 C9orf43Q8TAL5 461 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-220ENST00000522658 PGAP3Q96FM1 320 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-220ENST00000522658 PDXPQ96GD0 296 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 C20orf173Q96LM9 149 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 CFAP57Q96MR6 1250 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 NPY6RQ99463 290 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 APOOQ9BUR5 198 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 CLPBQ9H078 707 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 RETREG1Q9H6L5 497 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 WDR26Q9H7D7 661 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 ACP6Q9NPH0 428 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 PLCB1Q9NQ66 1216 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 METTL5Q9NRN9 209 aaKnown RBP6.26□□□□□ -1.41
PABPC1-220ENST00000522658 GOLGA6AQ9NYA3 693 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 LRIT1Q9P2V4 623 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 PPARGC1AQ9UBK2 798 aaKnown RBP6.26□□□□□ -1.41
PABPC1-220ENST00000522658 DNAI1Q9UI46 699 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 TUBD1Q9UJT1 453 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 MAN1B1Q9UKM7 699 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 CNTN6Q9UQ52 1028 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 ZNF281Q9Y2X9 895 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 COQ6Q9Y2Z9 468 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 OR1A2Q9Y585 309 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 RNF215Q9Y6U7 377 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 TRPM6Q9BX84 2022 aa6.26□□□□□ -1.41
PABPC1-220ENST00000522658 IGLV3-10A0A075B6K4 115 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 FAM170AA1A519 330 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 FITM1A5D6W6 292 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 CYSRT1A8MQ03 144 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 NUDT21O43809 227 aaKnown RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 NUAK1O60285 661 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 PIGNO95427 931 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 LSM8O95777 96 aaKnown RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 TPM2P07951 284 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 PRKAR1AP10644 381 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 PNLIPP16233 465 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 SERPINA4P29622 427 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 ACVRL1P37023 503 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 BUD31P41223 144 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 CYP4F2P78329 520 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 SRSF6Q13247 344 aaKnown RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 EIF4EBP2Q13542 120 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 SKIDA1Q1XH10 827 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 TPRG1LQ5T0D9 272 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 CERCAMQ5T4B2 595 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 SPECC1LQ69YQ0 1117 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 TTI2Q6NXR4 508 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 GJB7Q6PEY0 223 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 BRAT1Q6PJG6 821 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 FOXR2Q6PJQ5 311 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 CACNA2D3Q8IZS8 1091 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 FAM26EQ8N5C1 309 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 TP53I13Q8NBR0 393 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 LMO3Q8TAP4 145 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 RNF141Q8WVD5 230 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 SHC3Q92529 594 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 CENPTQ96BT3 561 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 HMCESQ96FZ2 354 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 EXOC2Q96KP1 924 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 TIGD1Q96MW7 591 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 TAAR9Q96RI9 348 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 RBM15Q96T37 977 aaKnown RBP eCLIP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 KLF6Q99612 283 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 DPYSL5Q9BPU6 564 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 GSDMCQ9BYG8 508 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 ASPSCR1Q9BZE9 553 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 TTYH3Q9C0H2 523 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 EPN3Q9H201 632 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 ATP13A3Q9H7F0 1226 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 CATSPERBQ9H7T0 1116 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 CAAP1Q9H8G2 361 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 GPN2Q9H9Y4 310 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 MBNL1Q9NR56 388 aaKnown RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 PHPT1Q9NRX4 125 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 TMEM248Q9NWD8 314 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 FOXJ2Q9P0K8 574 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 UBA2Q9UBT2 640 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-220ENST00000522658 OR12D3Q9UGF7 316 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 DNAJC12Q9UKB3 198 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 APPL1Q9UKG1 709 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 DAAM1Q9Y4D1 1078 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 MGAQ8IWI9 3026 aa6.25□□□□□ -1.41
PABPC1-220ENST00000522658 TENM4Q6N022 2769 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 MYO18BQ8IUG5 2567 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 A0A1W2PQM1 296 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 PRSS38A1L453 326 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 AREL1O15033 823 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 TEX33O43247 280 aa6.24□□□□□ -1.41
PABPC1-220ENST00000522658 DUX1O43812 170 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms