RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 HJURPQ8NCD3 748 aaPredicted RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 GRIN3AQ8TCU5 1115 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 TWIST2Q8WVJ9 160 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 AZIN2Q96A70 460 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 VPS35Q96QK1 796 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF214Q9UL59 606 aaPredicted RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 FAM189A1O60320 539 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 MT-CYBP00156 380 aaPredicted RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 EIF2S1P05198 315 aaKnown RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 CNPP09543 421 aaKnown RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 DHRS4L1P0CG22 281 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 ITGA2P17301 1181 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 PRKCQQ04759 706 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 ACAP2Q15057 778 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 PARP15Q460N3 678 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 VPS26BQ4G0F5 336 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 METTL3Q86U44 580 aaKnown RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 LEMD2Q8NC56 503 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 GPR152Q8TDT2 470 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 MAGEB10Q96LZ2 347 aaPredicted RBP13.77□□□□□ -0.21
SYNPO-205ENST00000522122 ADGRE2Q9UHX3 823 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 TIMM22Q9Y584 194 aa13.77□□□□□ -0.21
SYNPO-205ENST00000522122 TRIM43BA6NCK2 446 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF487B1APH4 448 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 CYP7B1O75881 506 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 HOXB6P17509 224 aaKnown RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 CYP3A5P20815 502 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 FEN1P39748 380 aaKnown RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 PCLAFQ15004 111 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 SKIV2LQ15477 1246 aaKnown RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 AP5B1Q2VPB7 878 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 EPGNQ6UW88 154 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 ZC3H7AQ8IWR0 971 aaKnown RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 SPPL2BQ8TCT7 592 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 FTHL17Q9BXU8 183 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 HMX1Q9NP08 348 aaPredicted RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 CCNB1IP1Q9NPC3 277 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 RAD18Q9NS91 495 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 CORO2BQ9UQ03 480 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 GSTK1Q9Y2Q3 226 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 E9PAM4 449 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 QSOX1O00391 747 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 MATN3O15232 486 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 NPHS1O60500 1241 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 TAF10Q12962 218 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 SFT2D3Q587I9 215 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF57Q68EA5 555 aaPredicted RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 NCBP2-AS2Q69YL0 99 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 CLEC6AQ6EIG7 209 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 ZNF554Q86TJ5 538 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 LDB1Q86U70 411 aaPredicted RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 CFAP52Q8N1V2 620 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 G3V2T6 193 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 PEX10O60683 326 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 BMP10O95393 424 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 DBTP11182 482 aaKnown RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 RPL3P39023 403 aaKnown RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 ATXN1P54253 815 aaKnown RBP13.76□□□□□ -0.21
SYNPO-205ENST00000522122 XKR6Q5GH73 641 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 CDC73Q6P1J9 531 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 FAM151BQ6UXP7 276 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 DSG4Q86SJ6 1040 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 SAPCD2Q86UD0 394 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 PQLC3Q8N755 202 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 STYXQ8WUJ0 223 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 C12orf42Q96LP6 360 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 SLC17A6Q9P2U8 582 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 KCNE2Q9Y6J6 123 aa13.76□□□□□ -0.21
SYNPO-205ENST00000522122 GUCY1B2O75343 617 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 CLDN11O75508 207 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 GNPDA1P46926 289 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 NDUFV1P49821 464 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 POLR2JP52435 117 aaKnown RBP13.75□□□□□ -0.21
SYNPO-205ENST00000522122 DAOAP59103 153 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 TAS2R39P59534 338 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 SGCGQ13326 291 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 CHMP1BQ7LBR1 199 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 KBTBD8Q8NFY9 601 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 GIPC3Q8TF64 312 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 PRR11Q96HE9 360 aaPredicted RBP13.75□□□□□ -0.21
SYNPO-205ENST00000522122 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 EHD3Q9NZN3 535 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 CBFA2T3O75081 653 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 TSC22D2O75157 780 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 LRATO95237 230 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 ALFQ53S48 1182 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 NRAPQ86VF7 1730 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 CAND1Q86VP6 1230 aaKnown RBP13.75□□□□□ -0.21
SYNPO-205ENST00000522122 WDTC1Q8N5D0 677 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 PHF10Q8WUB8 498 aaKnown RBP13.75□□□□□ -0.21
SYNPO-205ENST00000522122 S100ZQ8WXG8 99 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 SNX27Q96L92 541 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 TWNKQ96RR1 684 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 MUC13Q9H3R2 512 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 ABCB10Q9NRK6 738 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 CLN6Q9NWW5 311 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 GTF2A1LQ9UNN4 478 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 ENTPD4Q9Y227 616 aa13.75□□□□□ -0.21
SYNPO-205ENST00000522122 TREHO43280 583 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms