RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 MAGEC3Q8TD91 643 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 RHBDF1Q96CC6 855 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 GAD1Q99259 594 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 PCYT2Q99447 389 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 SRSF8Q9BRL6 282 aaKnown RBP5.09□□□□□ -1.59
SKP1-208ENST00000521216 MAK16Q9BXY0 300 aaKnown RBP5.09□□□□□ -1.59
SKP1-208ENST00000521216 WDR26Q9H7D7 661 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 LTB4R2Q9NPC1 389 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 MCM9Q9NXL9 1143 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 STK39Q9UEW8 545 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 ADD3Q9UEY8 706 aaKnown RBP5.09□□□□□ -1.59
SKP1-208ENST00000521216 FBXL17Q9UF56 701 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 VPS28Q9UK41 221 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 FBXL2Q9UKC9 423 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 NENFQ9UMX5 172 aa5.09□□□□□ -1.59
SKP1-208ENST00000521216 RSF1Q96T23 1441 aaPredicted RBP5.08□□□□□ -1.6
SKP1-208ENST00000521216 PDS5AQ29RF7 1337 aaKnown RBP5.08□□□□□ -1.6
SKP1-208ENST00000521216 EIF4E1BA6NMX2 242 aaKnown RBP5.08□□□□□ -1.6
SKP1-208ENST00000521216 A8MZ25 164 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 ACOT8O14734 319 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 TPPPO94811 219 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 OR2C1O95371 312 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 HIST1H2ABP04908 130 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 ICAM1P05362 532 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 SRPRAP08240 638 aaKnown RBP5.08□□□□□ -1.6
SKP1-208ENST00000521216 LINC00271P0C7V0 271 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 FGF3P11487 239 aaPredicted RBP5.08□□□□□ -1.6
SKP1-208ENST00000521216 GABRB1P18505 474 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 HIST1H2ADP20671 130 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 NLRP5P59047 1200 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 MRPS34P82930 218 aaKnown RBP5.08□□□□□ -1.6
SKP1-208ENST00000521216 CREB5Q02930 508 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 CCDC96Q2M329 555 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 ASTE1Q2TB18 679 aaPredicted RBP5.08□□□□□ -1.6
SKP1-208ENST00000521216 JADE1Q6IE81 842 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 CAPRIN2Q6IMN6 1127 aaKnown RBP5.08□□□□□ -1.6
SKP1-208ENST00000521216 HIST3H2AQ7L7L0 130 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 FASTKD5Q7L8L6 764 aaKnown RBP5.08□□□□□ -1.6
SKP1-208ENST00000521216 CCDC190Q86UF4 302 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 SFR1Q86XK3 245 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 ACVR1CQ8NER5 493 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 BICD1Q96G01 975 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 IGSF21Q96ID5 467 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 ZNF385AQ96PM9 386 aaKnown RBP5.08□□□□□ -1.6
SKP1-208ENST00000521216 OR2A14Q96R47 310 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 NUDCD1Q96RS6 583 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 C1QTNF4Q9BXJ3 329 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 SLCO5A1Q9H2Y9 848 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 GAREM1Q9H706 876 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 PCDH9Q9HC56 1237 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 OGFRQ9NZT2 677 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 TBC1D29Q9UFV1 150 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 FBXW11Q9UKB1 542 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 ACSL5Q9ULC5 683 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 PADI1Q9ULC6 663 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 GPR34Q9UPC5 381 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 AMDHD2Q9Y303 409 aa5.08□□□□□ -1.6
SKP1-208ENST00000521216 MAGEA13PA6NCF6 341 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 PRSS47A8MTI9 375 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 PROB1E7EW31 1015 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 OGG1O15527 345 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 PPP1R3DO95685 299 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 ALOX12P18054 663 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 CORO1AP31146 461 aaKnown RBP5.07□□□□□ -1.6
SKP1-208ENST00000521216 HOXD13P35453 343 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 SNX16P57768 344 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 BRWD1-AS2P59051 145 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 EEF1A2Q05639 463 aaKnown RBP5.07□□□□□ -1.6
SKP1-208ENST00000521216 SLC20A2Q08357 652 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 MEA1Q16626 185 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 IRAK1BP1Q5VVH5 260 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 C9orf57Q5W0N0 161 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 TMEM198Q66K66 360 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 RUSC1-AS1Q66K80 236 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.07□□□□□ -1.63e-9■■□□□ 12.3
SKP1-208ENST00000521216 RNF113BQ8IZP6 322 aaKnown RBP5.07□□□□□ -1.6
SKP1-208ENST00000521216 SPATA22Q8NHS9 363 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 SLC20A1Q8WUM9 679 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 FIG4Q92562 907 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 FAM120BQ96EK7 910 aaKnown RBP5.07□□□□□ -1.6
SKP1-208ENST00000521216 SAT2Q96F10 170 aaPredicted RBP5.07□□□□□ -1.6
SKP1-208ENST00000521216 PGAM5Q96HS1 289 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 EGLN2Q96KS0 407 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 QRFPRQ96P65 431 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 DUX5Q96PT3 197 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 SEMA3CQ99985 751 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 SPRY4Q9C004 299 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 SIL1Q9H173 461 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 LRRC4Q9HBW1 653 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 EPB41L5Q9HCM4 733 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 MTMR10Q9NXD2 777 aa5.07□□□□□ -1.6
SKP1-208ENST00000521216 FBXO2Q9UK22 296 aaPredicted RBP5.07□□□□□ -1.6
SKP1-208ENST00000521216 KANSL1LA0AUZ9 987 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 DENND3A2RUS2 1198 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 IKBKBO14920 756 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 DAB1O75553 588 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 S1PR1P21453 382 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 GCH1P30793 250 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 MSH2P43246 934 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 AMPHP49418 695 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms