RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 SDHDO14521 159 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 PRMT5O14744 637 aaPredicted RBP11.3□□□□□ -0.6
CLK4-206ENST00000520878 ECI2O75521 394 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 RFPL2O75678 378 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 ADH1AP07327 375 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 SERPINA4P29622 427 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 ARF5P84085 180 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 CLCQ05315 142 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 ZNF549Q6P9A3 640 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 LCA5Q86VQ0 697 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 SERPINA9Q86WD7 417 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 CACUL1Q86Y37 369 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 ZNF683Q8IZ20 524 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 TMEM199Q8N511 208 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 NKAPQ8N5F7 415 aaKnown RBP11.3□□□□□ -0.6
CLK4-206ENST00000520878 TEX26Q8N6G2 289 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 WFDC5Q8TCV5 224 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 TWIST2Q8WVJ9 160 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 TOP1MTQ969P6 601 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 CXorf56Q9H5V9 222 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 ZNF212Q9UDV6 495 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 EIF2B4Q9UI10 523 aaKnown RBP11.3□□□□□ -0.6
CLK4-206ENST00000520878 FAM92AA1XBS5 289 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 SNRPB2P08579 225 aaKnown RBP11.3□□□□□ -0.6
CLK4-206ENST00000520878 THOP1P52888 689 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 DSG1Q02413 1049 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 TUBB3Q13509 450 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 MYO1HQ8N1T3 1032 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 FNDC5Q8NAU1 212 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 PCYOX1LQ8NBM8 494 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 GPR78Q96P69 363 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 ZNF184Q99676 751 aaPredicted RBP11.3□□□□□ -0.6
CLK4-206ENST00000520878 MGME1Q9BQP7 344 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 VN1R3Q9BXE9 311 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 SEMA6AQ9H2E6 1030 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 HCFC1R1Q9NWW0 138 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 ZNHIT2Q9UHR6 403 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 MKI67P46013 3256 aaKnown RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 TGM5O43548 720 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 SLC25A14O95258 325 aaPredicted RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 CD1DP15813 335 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 XRCC1P18887 633 aaPredicted RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 PFKPQ01813 784 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 NR6A1Q15406 480 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 VPS26BQ4G0F5 336 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 UGT3A1Q6NUS8 523 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 SLC39A11Q8N1S5 342 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 KLHL23Q8NBE8 558 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 SLC45A3Q96JT2 553 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 PCDHAC1Q9H158 963 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 CWH43Q9H720 699 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 ATP13A3Q9H7F0 1226 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 S100A14Q9HCY8 104 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 COMMD8Q9NX08 183 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 IL37Q9NZH6 218 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 CIDEBQ9UHD4 219 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 RPL26L1Q9UNX3 145 aaKnown RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 ZNF638Q14966 1978 aaKnown RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 LAMA2P24043 3122 aaKnown RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 H3BMM5 538 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 SYNCRIPO60506 623 aaKnown RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 PARNO95453 639 aaKnown RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 GLUD1P00367 558 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 RAP1GDS1P52306 607 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 HERVK_113P63132 956 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 FRG1Q14331 258 aaKnown RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 IL27RAQ6UWB1 636 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 ISL2Q96A47 359 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 DCUN1D1Q96GG9 259 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 GBP5Q96PP8 586 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 RANBP9Q96S59 729 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 TTLL2Q9BWV7 592 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 KLF16Q9BXK1 252 aaPredicted RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 ERVK-6Q9BXR3 956 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 NLE1Q9NVX2 485 aaPredicted RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 CROTQ9UKG9 612 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 ZNF711Q9Y462 761 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 GON4LQ3T8J9 2241 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 ABHD14A-ACY1A0A1B0GW23 586 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 MROH6A6NGR9 719 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 TBC1D4O60343 1298 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 GMNNO75496 209 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 ZDHHC11BP0C7U3 371 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 OGNP20774 298 aaKnown RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 PPM1AP35813 382 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 CAPRIN1Q14444 709 aaKnown RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 UNC50Q53HI1 259 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 ZNF678Q5SXM1 525 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 CAPRIN2Q6IMN6 1127 aaKnown RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 DNAJB14Q8TBM8 379 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 EME1Q96AY2 570 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 AKTIPQ9H8T0 292 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 CERS4Q9HA82 394 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 KIAA1522Q9P206 1035 aaPredicted RBP11.29□□□□□ -0.6
CLK4-206ENST00000520878 SLC25A13Q9UJS0 675 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 SNX13Q9Y5W8 968 aa11.29□□□□□ -0.6
CLK4-206ENST00000520878 ZNF195O14628 629 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 PER2O15055 1255 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 SH3BGRLO75368 114 aa11.28□□□□□ -0.6
CLK4-206ENST00000520878 OR4F21O95013 312 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms