RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TMEM8BA6NDV4 472 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 URADA6NGE7 173 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 RSL1D1O76021 490 aaKnown RBP5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 RECQL5O94762 991 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 VNN2O95498 520 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 CELA2AP08217 269 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 KELP23276 732 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 PIGAP37287 484 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 MATR3P43243 847 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 CSNK2A1P68400 391 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 MAD2L1Q13257 205 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 Q4G0T1 1027 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 WASHC2DQ5SRD0 308 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 NUGGCQ68CJ6 796 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 HAUS6Q7Z4H7 955 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 CAMKMTQ7Z624 323 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 DSELQ8IZU8 1212 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 ZBTB8BQ8NAP8 495 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 CSNK2A3Q8NEV1 391 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 Q8NFD4 153 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 HM13Q8TCT9 377 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 APBB2Q92870 758 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 SLC25A23Q9BV35 468 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 NRIP3Q9NQ35 241 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 PFDN4Q9NQP4 134 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 HEY2Q9UBP5 337 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 SLC9A2Q9UBY0 812 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 DDX25Q9UHL0 483 aaKnown RBP5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 HACL1Q9UJ83 578 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 TMEM184BQ9Y519 407 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 HS3ST3B1Q9Y662 390 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 SQORQ9Y6N5 450 aa5.31□□□□□ -1.56
HMGB1P46-201ENST00000520062 EIF4E1BA6NMX2 242 aaKnown RBP5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 VWA5AO00534 786 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 CLGNO14967 610 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 HSPA12AO43301 675 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 ITM2AO43736 263 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 FSHBP01225 129 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 G6PDP11413 515 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 CYP19A1P11511 503 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 GJA1P17302 382 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 NR2F2P24468 414 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 PTAFRP25105 342 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 EIF2S3P41091 472 aaKnown RBP5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 ENTPD1P49961 510 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 MYBPC2Q14324 1141 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 GPR18Q14330 331 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 MVPQ14764 893 aaKnown RBP5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 SNAPC1Q16533 368 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 EIF2S3LQ2VIR3 472 aaKnown RBP5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 MANEAQ5SRI9 462 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 DCST1Q5T197 706 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 ARMC4Q5T2S8 1044 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 MORN5Q5VZ52 161 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 LCN10Q6JVE6 187 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 KCTD18Q6PI47 426 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 SLC2A7Q6PXP3 512 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 TPRG1Q6ZUI0 275 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 FAM47EQ6ZV65 393 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 INTS8Q75QN2 995 aaKnown RBP5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 ZNF367Q7RTV3 350 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 LDB1Q86U70 411 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 CCDC190Q86UF4 302 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 ADIPOR2Q86V24 386 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 HDAC11Q96DB2 347 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 VMP1Q96GC9 406 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 APOLD1Q96LR9 279 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 SPAG5Q96R06 1193 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 TMEM79Q9BSE2 394 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 SYT17Q9BSW7 474 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 GPR88Q9GZN0 384 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 OPA3Q9H6K4 179 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 PIH1D3Q9NQM4 214 aaKnown RBP5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 CNGB3Q9NQW8 809 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 LARSQ9P2J5 1176 aaKnown RBP5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 GTF3C4Q9UKN8 822 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 CDC14AQ9UNH5 594 aa5.3□□□□□ -1.56
HMGB1P46-201ENST00000520062 FLT1P17948 1338 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 PI4K2BG5E9Z4 385 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 I6L893 689 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 SPINT2O43291 252 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 MOSPD3O75425 235 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 C22orf31O95567 290 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 EGFP01133 1207 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 FGBP02675 491 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 NAGAP17050 411 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 GP5P40197 560 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 RAB28P51157 221 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 PPARDQ03181 441 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 CAMK2DQ13557 499 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 CTTNQ14247 550 aaKnown RBP5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 KRT33BQ14525 404 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 DECR1Q16698 335 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 LETM2Q2VYF4 491 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 OTUD1Q5VV17 481 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 C11orf88Q6PI97 169 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 DCLRE1AQ6PJP8 1040 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 B3GNT6Q6ZMB0 384 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 Q6ZSV7 163 aa5.29□□□□□ -1.56
HMGB1P46-201ENST00000520062 ERN2Q76MJ5 926 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms