RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 PAAF1Q9BRP4 392 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 FICDQ9BVA6 458 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 FTHL17Q9BXU8 183 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 RBCK1Q9BYM8 510 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 TRIM4Q9C037 500 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 TASP1Q9H6P5 420 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 NOL6Q9H6R4 1146 aaKnown RBP5.06□□□□□ -1.6
SDC2-204ENST00000519914 CAB39LQ9H9S4 337 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 CARS2Q9HA77 564 aaKnown RBP5.06□□□□□ -1.6
SDC2-204ENST00000519914 MEAF6Q9HAF1 191 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 POPDC3Q9HBV1 291 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 ZBTB26Q9HCK0 441 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 PIH1D1Q9NWS0 290 aaKnown RBP5.06□□□□□ -1.6
SDC2-204ENST00000519914 COX16Q9P0S2 106 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 BCAP29Q9UHQ4 241 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 ZDHHC2Q9UIJ5 367 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 SCOCQ9UIL1 159 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 FBXO5Q9UKT4 447 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 CNOT11Q9UKZ1 510 aaKnown RBP5.06□□□□□ -1.6
SDC2-204ENST00000519914 SLC39A10Q9ULF5 831 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 PADI3Q9ULW8 664 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 MAGED2Q9UNF1 606 aaPredicted RBP5.06□□□□□ -1.6
SDC2-204ENST00000519914 PSMD13Q9UNM6 376 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 RUVBL2Q9Y230 463 aaKnown RBP5.06□□□□□ -1.6
SDC2-204ENST00000519914 CDYLQ9Y232 598 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 ACOT9Q9Y305 439 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 TIMM13Q9Y5L4 95 aaPredicted RBP5.06□□□□□ -1.6
SDC2-204ENST00000519914 HS3ST4Q9Y661 456 aa5.06□□□□□ -1.6
SDC2-204ENST00000519914 PRSS51A0A1B0GVH4 220 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 CASTOR2A6NHX0 329 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 MEI4A8MW99 385 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 SDHDO14521 159 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 DENRO43583 198 aaKnown RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 DCXO43602 365 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 BCAS2O75934 225 aaPredicted RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 B3GAT3O94766 335 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 MT-CYBP00156 380 aaPredicted RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 CHRNGP07510 517 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 LYNP07948 512 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 MMP2P08253 660 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 RBP1P09455 135 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 ATXN1LP0C7T5 689 aaKnown RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 ZDHHC11BP0C7U3 371 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 CCDC166P0CW27 439 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 UQCRBP14927 111 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 IBSPP21815 317 aaPredicted RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 CD9P21926 228 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 CD52P31358 61 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 BRCC3P46736 316 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 MAPKAPK2P49137 400 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 ACADVLP49748 655 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 RENBPP51606 427 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 RABGGTBP53611 331 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 WNT3AP56704 352 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 YBEYP58557 167 aaPredicted RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 TAS2R39P59534 338 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 MXRA7P84157 204 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 MPP1Q00013 466 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 RING1Q06587 406 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 IL10RBQ08334 325 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 SMARCB1Q12824 385 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 TRAP1Q12931 704 aaKnown RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 CYLC2Q14093 348 aaPredicted RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 SQLEQ14534 574 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 ACAP2Q15057 778 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 MAPRE2Q15555 327 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 NFE2Q16621 373 aaPredicted RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 FAM83EQ2M2I3 478 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 USP41Q3LFD5 358 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 SPATS1Q496A3 300 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 RALGPS1Q5JS13 557 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 CFAP157Q5JU67 520 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 VWA5B1Q5TIE3 1220 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 PIK3R6Q5UE93 754 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 AGAP9Q5VTM2 703 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 MFSD14CQ5VZR4 134 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 CST9Q5W186 159 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 NEPROQ6NW34 567 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 TMEM154Q6P9G4 183 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 IZUMO2Q6UXV1 221 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 PRR23BQ6ZRT6 265 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 CTU1Q7Z7A3 348 aaKnown RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 C14orf80Q86SX3 495 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 SLC41A1Q8IVJ1 513 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 CEP97Q8IW35 865 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 DCP1BQ8IZD4 617 aaKnown RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 DSELQ8IZU8 1212 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 PQLC1Q8N2U9 271 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 MARVELD2Q8N4S9 558 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 AFAP1L2Q8N4X5 818 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 CATSPER1Q8NEC5 780 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 OR13J1Q8NGT2 312 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 SPATA22Q8NHS9 363 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 UCMAQ8WVF2 138 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 KCTD4Q8WVF5 259 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 NXNL1Q96CM4 212 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 L3HYPDHQ96EM0 354 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 CELF6Q96J87 481 aaKnown RBP5.05□□□□□ -1.6
SDC2-204ENST00000519914 ZNF599Q96NL3 588 aa5.05□□□□□ -1.6
SDC2-204ENST00000519914 NECAB3Q96P71 396 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms