RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TRA2AQ13595 282 aaKnown RBP eCLIP12.34□□□□□ -0.43
CSMD1-205ENST00000519623 LINC00303Q3SY05 128 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-205ENST00000519623 SLC9A4Q6AI14 798 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 VSIG1Q86XK7 387 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 GALNT13Q8IUC8 556 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 SFRP1Q8N474 314 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 EXD3Q8N9H8 876 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 OR4D9Q8NGE8 314 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 SGF29Q96ES7 293 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 MED8Q96G25 268 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 CCDC74BQ96LY2 380 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 TRIB3Q96RU7 358 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 MLPHQ9BV36 600 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-205ENST00000519623 FAM83DQ9H4H8 585 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 HAUS2Q9NVX0 235 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 WDR70Q9NW82 654 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 VPS18Q9P253 973 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 PDP2Q9P2J9 529 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 ZNHIT2Q9UHR6 403 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 PRKAB1Q9Y478 270 aa12.34□□□□□ -0.43
CSMD1-205ENST00000519623 SETXQ7Z333 2677 aaKnown RBP12.33□□□□□ -0.44
CSMD1-205ENST00000519623 LRRD1A4D1F6 860 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 AKR1B10O60218 316 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 MTA2O94776 668 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 TPM3P06753 285 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 WT1P19544 449 aaPredicted RBP12.33□□□□□ -0.44
CSMD1-205ENST00000519623 MPSTP25325 297 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 CD82P27701 267 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 ARHGAP25P42331 645 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 BIRC2Q13490 618 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 ZFYVE27Q5T4F4 411 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 TMEM164Q5U3C3 297 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 TMEM71Q6P5X7 295 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 IYDQ6PHW0 289 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 CHST15Q7LFX5 561 aaPredicted RBP12.33□□□□□ -0.44
CSMD1-205ENST00000519623 VASH2Q86V25 355 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 ZNF761Q86XN6 746 aaPredicted RBP12.33□□□□□ -0.44
CSMD1-205ENST00000519623 SLC37A2Q8TED4 501 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 PMEPA1Q969W9 287 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 TADA1Q96BN2 335 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 IMP4Q96G21 291 aaKnown RBP12.33□□□□□ -0.44
CSMD1-205ENST00000519623 TAAR9Q96RI9 348 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 DPYSL5Q9BPU6 564 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 ADGRE3Q9BY15 652 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 KCNK4Q9NYG8 393 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 AKAP7Q9P0M2 348 aaPredicted RBP12.33□□□□□ -0.44
CSMD1-205ENST00000519623 TMEM9Q9P0T7 183 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 SEPT10Q9P0V9 454 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 TBC1D29Q9UFV1 150 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 PCDHGA3Q9Y5H0 932 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 HEY1Q9Y5J3 304 aa12.33□□□□□ -0.44
CSMD1-205ENST00000519623 TENM4Q6N022 2769 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 A6NCN8 305 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 B8ZZF3 427 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 THRAP10827 490 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 GPLD1P80108 840 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 AP1B1Q10567 949 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 GALNT3Q14435 633 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 MANEAQ5SRI9 462 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 LRRC38Q5VT99 294 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 NPNTQ6UXI9 565 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 LYSMD3Q7Z3D4 306 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 TMC3Q7Z5M5 1100 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 AGBL5Q8NDL9 886 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 CCHCR1Q8TD31 782 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 ZNF830Q96NB3 372 aaPredicted RBP12.32□□□□□ -0.44
CSMD1-205ENST00000519623 OLFM3Q96PB7 478 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 CEP41Q9BYV8 373 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 DEF6Q9H4E7 631 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 RMI1Q9H9A7 625 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 NHEJ1Q9H9Q4 299 aaPredicted RBP12.32□□□□□ -0.44
CSMD1-205ENST00000519623 ZFYVE1Q9HBF4 777 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 ABHD10Q9NUJ1 306 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 SPTLC3Q9NUV7 552 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 OCIAD1Q9NX40 245 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 PKD2L2Q9NZM6 624 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 ATXN10Q9UBB4 475 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 PCDHB11Q9Y5F2 797 aa12.32□□□□□ -0.44
CSMD1-205ENST00000519623 TLN1Q9Y490 2541 aaKnown RBP12.32□□□□□ -0.44
CSMD1-205ENST00000519623 APOL1O14791 398 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 GRID2O43424 1007 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 CBFA2T2O43439 604 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 NUAK1O60285 661 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 ITGB2P05107 769 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 ZNF8P17098 575 aaPredicted RBP12.31□□□□□ -0.44
CSMD1-205ENST00000519623 CSTF2P33240 577 aaKnown RBP eCLIP12.31□□□□□ -0.44
CSMD1-205ENST00000519623 TRIM14Q14142 442 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 PDK1Q15118 436 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 TCEAL1Q15170 157 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 ZNF648Q5T619 568 aaPredicted RBP12.31□□□□□ -0.44
CSMD1-205ENST00000519623 B4GALNT4Q76KP1 1039 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 KDELC2Q7Z4H8 507 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 ARHGAP22Q7Z5H3 698 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 NT5DC3Q86UY8 548 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 VSTM4Q8IW00 320 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 BMPERQ8N8U9 685 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 GPR26Q8NDV2 337 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 NKD1Q969G9 470 aa12.31□□□□□ -0.44
CSMD1-205ENST00000519623 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms