RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 EPB41L5Q9HCM4 733 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 NT5MQ9NPB1 228 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 TRNAU1APQ9NX07 287 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 LRIT1Q9P2V4 623 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 PCDHGA7Q9Y5G6 932 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 CFAP46Q8IYW2 2715 aa12.42□□□□□ -0.42
TRAPPC9-206ENST00000519482 MATN3O15232 486 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 MFSD11O43934 449 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 PROSCO94903 275 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 CD48P09326 243 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 ZNF30P17039 623 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 COMTP21964 271 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 CCNCP24863 283 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 CDK3Q00526 305 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 ITKQ08881 620 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 VAC14Q08AM6 782 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 C19orf57Q0VDD7 668 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 ILF3Q12906 894 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 MESDQ14696 234 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 ANKRD20A8PQ5CZ79 823 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 NCBP2-AS2Q69YL0 99 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 RAET1GQ6H3X3 334 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 EMBQ6PCB8 327 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 Q6ZVL8 140 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 SPRED1Q7Z699 444 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 TECPR1Q7Z6L1 1165 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 B3GNT8Q7Z7M8 397 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 NLRP8Q86W28 1048 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 C17orf82Q86X59 251 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 RAVER1Q8IY67 606 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 FBXO39Q8N4B4 442 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 KCTD6Q8NC69 237 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 CCL4L1Q8NHW4 92 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 MAML1Q92585 1016 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 TMEM159Q96B96 161 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 WBP1Q96G27 269 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 TSGA13Q96PP4 275 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 HELZ2Q9BYK8 2649 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 CPNE5Q9HCH3 593 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 DNPEPQ9ULA0 475 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 PACSIN2Q9UNF0 486 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 RNF215Q9Y6U7 377 aa12.41□□□□□ -0.42
TRAPPC9-206ENST00000519482 A0A0J9YYE9 177 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 PMS2P1A4D2B8 440 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 B4DGG1 531 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 ZW10O43264 779 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 TRBC1P01850 177 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 FGF1P05230 155 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 PYGLP06737 847 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 IVLP07476 585 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 PDHA1P08559 390 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 KRT7P08729 469 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 CTPS1P17812 591 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 CA4P22748 312 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 MAN1A1P33908 653 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 UGT1A5P35504 534 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 RWDD2BP57060 319 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 ZFP36L1Q07352 338 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 CUL1Q13616 776 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 CLPPQ16740 277 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 ATP13A4Q4VNC1 1196 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 ARHGAP40Q5TG30 622 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 ZNF765Q7L2R6 523 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 TSPAN33Q86UF1 283 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 NRROSQ86YC3 692 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 Q8N9G6 341 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 FAF2Q96CS3 445 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 FOXP3Q9BZS1 431 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 SPATS2LQ9NUQ6 558 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 ACSL6Q9UKU0 697 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 SUFUQ9UMX1 484 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 SLC17A4Q9Y2C5 497 aa12.4□□□□□ -0.42
TRAPPC9-206ENST00000519482 GOLGA6CA6NDK9 693 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 GOLGA6BA6NDN3 693 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 FAM187AA6NFU0 413 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 CAPN8A6NHC0 703 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 SPOPO43791 374 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 FUCA1P04066 466 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 JMJD7P0C870 316 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 GOLGA6DP0CG33 693 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 MX2P20592 715 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 CTNNA1P35221 906 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 GJC1P36383 396 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 CETN2P41208 172 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 GPR1P46091 355 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 GNPDA1P46926 289 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 EPHB1P54762 984 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 DRG2P55039 364 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 RPL26P61254 145 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 B4GALNT1Q00973 533 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 PTSQ03393 145 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 NR1D2Q14995 579 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 LRRC66Q68CR7 880 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 ADAMTSL4Q6UY14 1074 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 ZNF438Q7Z4V0 828 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 SFTPA2Q8IWL1 248 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 NRSN1Q8IZ57 195 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 ZDHHC1Q8WTX9 485 aa12.39□□□□□ -0.43
TRAPPC9-206ENST00000519482 AP2M1Q96CW1 435 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms