RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SLC12A4Q9UP95 1085 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 SORCS3Q9UPU3 1222 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 CRYL1Q9Y2S2 319 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 A0A0G2JND7 137 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 HGSO14964 777 aaPredicted RBP14.42□□□□□ -0.1
CLN8-204ENST00000519254 KLF8O95600 359 aaPredicted RBP14.42□□□□□ -0.1
CLN8-204ENST00000519254 PRNPP04156 253 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 GRK2P25098 689 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 SCTRP47872 440 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 METAP1P53582 386 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 TIAL1Q01085 375 aaKnown RBP eCLIP14.42□□□□□ -0.1
CLN8-204ENST00000519254 ACTN3Q08043 901 aaPredicted RBP14.42□□□□□ -0.1
CLN8-204ENST00000519254 HSF5Q4G112 596 aaPredicted RBP14.42□□□□□ -0.1
CLN8-204ENST00000519254 LRRC8EQ6NSJ5 796 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 AFTPHQ6ULP2 937 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 ZYG11AQ6WRX3 759 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 NAPRTQ6XQN6 538 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 MMAAQ8IVH4 418 aaKnown RBP14.42□□□□□ -0.1
CLN8-204ENST00000519254 RDH11Q8TC12 318 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 EID2BQ96D98 161 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 ECHDC3Q96DC8 303 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 TSNARE1Q96NA8 513 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 OSBPL1AQ9BXW6 950 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 MAGEE1Q9HCI5 957 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 FBXL21Q9UKT6 434 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 SARDHQ9UL12 918 aa14.42□□□□□ -0.1
CLN8-204ENST00000519254 A0A0J9YYE9 177 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 SHISA7A6NL88 538 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 SYNCRIPO60506 623 aaKnown RBP14.41□□□□□ -0.1
CLN8-204ENST00000519254 FSBPO95073 299 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 TRBC1P01850 177 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 PSMD8P48556 350 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 LIG3P49916 1009 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 ARFIP2P53365 341 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 RPL26P61254 145 aaKnown RBP14.41□□□□□ -0.1
CLN8-204ENST00000519254 E2F5Q15329 346 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 ZNF805Q5CZA5 627 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 SDE2Q6IQ49 451 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 LYSMD3Q7Z3D4 306 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 SDCCAG8Q86SQ7 713 aaPredicted RBP14.41□□□□□ -0.1
CLN8-204ENST00000519254 CRLF3Q8IUI8 442 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 GBP7Q8N8V2 638 aaPredicted RBP14.41□□□□□ -0.1
CLN8-204ENST00000519254 IL17RCQ8NAC3 791 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 TXNDC5Q8NBS9 432 aaKnown RBP14.41□□□□□ -0.1
CLN8-204ENST00000519254 PIP4K2CQ8TBX8 421 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 HEXDCQ8WVB3 486 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 TSPAN17Q96FV3 270 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 MSANTD3Q96H12 275 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 LRIG1Q96JA1 1093 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 SCYL1Q96KG9 808 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 UBXN10Q96LJ8 280 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 FAM129BQ96TA1 746 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 SORT1Q99523 831 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 TMEM120AQ9BXJ8 343 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 MYLK2Q9H1R3 596 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 ACTR5Q9H9F9 607 aaPredicted RBP14.41□□□□□ -0.1
CLN8-204ENST00000519254 BPIFA1Q9NP55 256 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 ARHGEF3Q9NR81 526 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 OXSMQ9NWU1 459 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 IL17CQ9P0M4 197 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 FKBPLQ9UIM3 349 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 RPL26L1Q9UNX3 145 aaKnown RBP14.41□□□□□ -0.1
CLN8-204ENST00000519254 ZNF711Q9Y462 761 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 ATG2BQ96BY7 2078 aa14.41□□□□□ -0.1
CLN8-204ENST00000519254 CAPN8A6NHC0 703 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 H7C0S8 307 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 NPC1O15118 1278 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 STX7O15400 261 aaKnown RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 TRIM13O60858 407 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 DCTN3O75935 186 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 MYL2P10916 166 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 FDXRP22570 491 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 XPAP23025 273 aaPredicted RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 NTSR1P30989 418 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 HNF1BP35680 557 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 CDKN1CP49918 316 aaPredicted RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 ABCE1P61221 599 aaKnown RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 ILF2Q12905 390 aaKnown RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 BNIP1Q12981 228 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 PEX6Q13608 980 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 TSNAXIP1Q2TAA8 658 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 FAM45BPQ6NSW5 357 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 BRAT1Q6PJG6 821 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 TMEM207Q6UWW9 146 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 USP45Q70EL2 814 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 TBC1D1Q86TI0 1168 aaPredicted RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 PIANPQ8IYJ0 282 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 RPLP0P6Q8NHW5 317 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 FAM45AQ8TCE6 357 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 LRRC37BQ96QE4 947 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 GPR63Q9BZJ6 419 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 UNKQ9C0B0 810 aaKnown RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 INTS10Q9NVR2 710 aaKnown RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 MID2Q9UJV3 735 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 PPM1HQ9ULR3 514 aa14.4□□□□□ -0.1
CLN8-204ENST00000519254 CORO1CQ9ULV4 474 aaPredicted RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 FNDC3AQ9Y2H6 1198 aaKnown RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 MTF2Q9Y483 593 aaPredicted RBP14.4□□□□□ -0.1
CLN8-204ENST00000519254 C1orf232A0A0U1RR37 186 aa14.39□□□□□ -0.11
CLN8-204ENST00000519254 NPIPB15A6NHN6 443 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms