RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 TRPV2Q9Y5S1 764 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 A0A1W2PP18 115 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 H3BMQ9 156 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 M0QZ92 97 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 ZNF701M0R085 212 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 MUSKO15146 869 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 MGEA5O60502 916 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 KPNA6O60684 536 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 BAIAP3O94812 1187 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 GPIP06744 558 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 RHOQP17081 205 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 YAP1P46937 504 aaKnown RBP16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 LIPEQ05469 1076 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 RCAN2Q14206 197 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 RAB39AQ14964 217 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 C16orf72Q14CZ0 275 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 USP50Q70EL3 339 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 ANKRD23Q86SG2 305 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 MAGEE2Q8TD90 523 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 SNRNP27Q8WVK2 155 aaKnown RBP16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 FATE1Q969F0 183 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 IGSF8Q969P0 613 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 COG8Q96MW5 612 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 PTPN18Q99952 460 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 TRIM54Q9BYV2 358 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 NAA50Q9GZZ1 169 aaKnown RBP16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 RPF2Q9H7B2 306 aaKnown RBP16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 FNIP2Q9P278 1114 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 ZNHIT2Q9UHR6 403 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 TLR6Q9Y2C9 796 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 MED16Q9Y2X0 877 aa16.48■□□□□ 0.23
PCDHGA11-202ENST00000518882 MYADML2A6NDP7 307 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 SUPT3HB4E1H0 165 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 SUPT3HO75486 399 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 SNAP29O95721 258 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 CAPGP40121 348 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 GPR15P49685 360 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 UFM1P61960 85 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 FOXM1Q08050 763 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 LCP2Q13094 533 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 COQ5Q5HYK3 327 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 GPR107Q5VW38 600 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 MSANTD2Q6P1R3 559 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 TAF2Q6P1X5 1199 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 TBPL2Q6SJ96 375 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 PAQR3Q6TCH7 311 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 SCIMPQ6UWF3 145 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 PTRH1Q86Y79 214 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 ZC3H15Q8WU90 426 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 SLC30A3Q99726 388 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 SEMA3CQ99985 751 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 KCTD14Q9BQ13 255 aaPredicted RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 AARSD1Q9BTE6 412 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 KATNAL1Q9BW62 490 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 SEZ6LQ9BYH1 1024 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 TFB2MQ9H5Q4 396 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 PIF1Q9H611 641 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 PLGRKTQ9HBL7 147 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 SMPD3Q9NY59 655 aaPredicted RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 ZNF225Q9UK10 706 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 CDH7Q9ULB5 785 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 V9GYQ6 96 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 PLXNA3P51805 1871 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 SH3PXD2BA1X283 911 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 CYBBP04839 570 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 PRR35P0CG20 571 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 TSPY1Q01534 308 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 POLD3Q15054 466 aaPredicted RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 TSNQ15631 228 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 FSCN1Q16658 493 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 MRNIPQ6NTE8 343 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 ABRAXAS1Q6UWZ7 409 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 TMEM26Q6ZUK4 368 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 FBXO39Q8N4B4 442 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 DHRSXQ8N5I4 330 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 GPR150Q8NGU9 434 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 CYP2S1Q96SQ9 504 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 AP5M1Q9H0R1 490 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 CD320Q9NPF0 282 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 CATSPERZQ9NTU4 200 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 INTS7Q9NVH2 962 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 FAM50BQ9Y247 325 aa16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 TDRKHQ9Y2W6 561 aaKnown RBP16.47■□□□□ 0.23
PCDHGA11-202ENST00000518882 KERAO60938 352 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 CD247P20963 164 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 CASP2P42575 452 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 RPS9P46781 194 aaKnown RBP16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 AGTR2P50052 363 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 TBX4P57082 545 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 PLCL1Q15111 1095 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 MAPRE1Q15691 268 aaKnown RBP16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 UGT3A1Q6NUS8 523 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 MRPL10Q7Z7H8 261 aaKnown RBP16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 PATL1Q86TB9 770 aaKnown RBP16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 KIAA1191Q96A73 305 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 SEPHS2Q99611 448 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 DOK1Q99704 481 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 C1orf50Q9BV19 199 aa16.46■□□□□ 0.23
PCDHGA11-202ENST00000518882 POLR1BQ9H9Y6 1135 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms