RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ILVBLA1L0T0 632 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 WIPF3A6NGB9 483 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 TMEM110-MUSTN1A8MSY1 372 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 K7EM74 188 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 HGSO14964 777 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 CETN3O15182 167 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 SLC16A3O15427 465 aaKnown RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 NKX2-8O15522 239 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 MTSS1O43312 755 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 NUDT21O43809 227 aaKnown RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 AKAP8O43823 692 aaKnown RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 KIF5CO60282 957 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 ENDOD1O94919 500 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 ADCY5O95622 1261 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 RHOCP08134 193 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 ALPIP09923 528 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 EPB41P11171 864 aaKnown RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 PFKFB1P16118 471 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 CMA1P23946 247 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 HSD3B2P26439 372 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 GKP32189 559 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 CASP2P42575 452 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 FMO5P49326 533 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 CXCR3P49682 368 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 LIG3P49916 1009 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 BLKP51451 505 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 THOP1P52888 689 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 MAPK10P53779 464 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 PMS1P54277 932 aaKnown RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 CDK17Q00537 523 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 GCNT1Q02742 428 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 LRMPQ12912 555 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 TMED1Q13445 227 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 SLBPQ14493 270 aaKnown RBP eCLIP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 ELOCQ15369 112 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 CLPPQ16740 277 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 WSCD2Q2TBF2 565 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 SPATS1Q496A3 300 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 COBLL1Q53SF7 1204 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 ATL3Q6DD88 541 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 CAPRIN2Q6IMN6 1127 aaKnown RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 ZNF783Q6ZMS7 281 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 BNIPLQ7Z465 357 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 Q8N9G6 341 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 KCT2Q8NC54 265 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 OR7D4Q8NG98 312 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 SVIPQ8NHG7 77 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 C9orf43Q8TAL5 461 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 ZNF606Q8WXB4 792 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 TSACCQ96A04 125 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 TAAR9Q96RI9 348 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 TSPY26PQ9H489 355 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 SYNDIG1Q9H7V2 258 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 CASS4Q9NQ75 786 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 ZNF71Q9NQZ8 489 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 PIGVQ9NUD9 493 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 DDIT4Q9NX09 232 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 SIRPGQ9P1W8 387 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 HECAQ9UBI9 543 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-207ENST00000518716 PILRAQ9UKJ1 303 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 SNX10Q9Y5X0 201 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 B3GALT1Q9Y5Z6 326 aa6.04□□□□□ -1.44
PABPC1-207ENST00000518716 CCDC168Q8NDH2 2452 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 PRRC2CQ9Y520 2896 aaKnown RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 IGHV5-10-1A0A0J9YXX1 117 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 A0A1B0GVL5 298 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 SLC22A31A6NKX4 558 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 ZNF891A8MT65 544 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 B4E171 279 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 M0QYT0 321 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 PES1O00541 588 aaKnown RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 P4HA2O15460 535 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 DUX1O43812 170 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 HSF2BPO75031 334 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 TM7SF2O76062 418 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 LETM1O95202 739 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 RASGRP1O95267 797 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 IPO7O95373 1038 aaKnown RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 CPNE6O95741 557 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 TPM2P07951 284 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 ZGLP1P0C6A0 271 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 CCDC159P0C7I6 412 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 TFE3P19532 575 aaPredicted RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 BMP6P22004 513 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 CD1CP29017 333 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 OAS2P29728 719 aaKnown RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 TSPAN7P41732 249 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 UQCRFS1P47985 274 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 ME1P48163 572 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 MLLT10P55197 1068 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 SRP54P61011 504 aaKnown RBP6.03□□□□□ -1.44
PABPC1-207ENST00000518716 KLRB1Q12918 225 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 PDCLQ13371 301 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 NFATC4Q14934 902 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 IRF4Q15306 451 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 TMEM52BQ4KMG9 183 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 C14orf28Q4W4Y0 310 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 EFHC1Q5JVL4 640 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 ANKRD40Q6AI12 368 aa6.03□□□□□ -1.44
PABPC1-207ENST00000518716 OLFML1Q6UWY5 402 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms