RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 FAM131BQ86XD5 332 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TMEM25Q86YD3 366 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CCDC105Q8IYK2 499 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SAXO1Q8IYX7 474 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 C11orf44Q8N8P7 122 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 C3orf20Q8ND61 904 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ADPRHL1Q8NDY3 354 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 NUP37Q8NFH4 326 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MYRIPQ8NFW9 859 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 OR5AP2Q8NGF4 316 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 OR2T11Q8NH01 316 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZNF596Q8TC21 504 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MARCH1Q8TCQ1 289 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 GLMPQ8WWB7 406 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 IP6K1Q92551 441 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PMM1Q92871 262 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TNPO1Q92973 898 aaKnown RBP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CCDC97Q96F63 343 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CLPTM1LQ96KA5 538 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 LINC00477Q96M19 166 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FOPNLQ96NB1 174 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RANBP9Q96S59 729 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 LGMNQ99538 433 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 OLFM1Q99784 485 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PSD2Q9BQI7 771 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 NEURL2Q9BR09 285 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RIOK1Q9BRS2 568 aaKnown RBP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SLC17A9Q9BYT1 436 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 LHPPQ9H008 270 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 XRN2Q9H0D6 950 aaKnown RBP eCLIP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZCWPW1Q9H0M4 648 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 QRSL1Q9H0R6 528 aaKnown RBP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 HIPK3Q9H422 1215 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 C10orf88Q9H8K7 445 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 Q9N2K0 584 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 WDR6Q9NNW5 1121 aaKnown RBP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 LHX9Q9NQ69 397 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SPHK2Q9NRA0 654 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RXFP3Q9NSD7 469 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 THG1LQ9NWX6 298 aaKnown RBP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 DUS2Q9NX74 493 aaKnown RBP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 HERC5Q9UII4 1024 aaKnown RBP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 DDX41Q9UJV9 622 aaKnown RBP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CNTN6Q9UQ52 1028 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 WDR37Q9Y2I8 494 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 OR2W1Q9Y3N9 320 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PCDHB2Q9Y5E7 798 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PCDHGA2Q9Y5H1 932 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CDY1Q9Y6F8 540 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CLCA3PQ9Y6N3 262 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RYR3Q15413 4870 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 COL22A1Q8NFW1 1626 aaPredicted RBP-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ARHGAP21Q5T5U3 1957 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 VWDEQ8N2E2 1590 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CACNA1CQ13936 2221 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ARHGAP23Q9P227 1491 aa-0.8□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PALLDQ8WX93 1383 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FLT1P17948 1338 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SPATA31D1Q6ZQQ2 1576 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 LOC105371242A0A075B767 164 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 IGHV4-61A0A0C4DH41 118 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 IGKV2-24A0A0C4DH68 120 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FAM231BA6NCW3 169 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 C15orf61A6NNL5 157 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FAM157AC9JC47 383 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PLOD2O00469 737 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 OGTO15294 1046 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MSH4O15457 936 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZNHIT1O43257 154 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 KLF4O43474 513 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 HCRTO43612 131 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TSPAN3O60637 253 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ICOSLGO75144 302 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MED6O75586 246 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PRDM1O75626 825 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SEC14L2O76054 403 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PDE9AO76083 593 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RGS11O94810 467 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 IL18RAPO95256 599 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 IGHV4-59P01825 116 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 UMPSP11172 480 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 EEF2P13639 858 aaKnown RBP-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CSF2RAP15509 400 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MSH3P20585 1137 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MAGP20916 626 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 HTR7P34969 479 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RFC1P35251 1148 aaPredicted RBP-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 AHRP35869 848 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ELK3P41970 407 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 CLCNKBP51801 687 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RHAGQ02094 409 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 FAM27E3Q08E93 113 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 SNTB1Q13884 538 aaKnown RBP-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 ZNF460Q14592 562 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 STAT4Q14765 748 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 RRS1Q15050 365 aaKnown RBP-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 PRR4Q16378 134 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 MTHFSDQ2M296 383 aaKnown RBP-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 TIMM50Q3ZCQ8 353 aa-0.81□□□□□ -2.54
RNU6-1238P-201ENST00000517215 DNLZQ5SXM8 178 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms