RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 TSPAN33Q86UF1 283 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 CENPIQ92674 756 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-231ENST00000515620 RNF25Q96BH1 459 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-231ENST00000515620 SNRNP40Q96DI7 357 aaKnown RBP10.39□□□□□ -0.75
CLDND1-231ENST00000515620 HERPUD2Q9BSE4 406 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-231ENST00000515620 SP110Q9HB58 689 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 ASF1BQ9NVP2 202 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 OGFRQ9NZT2 677 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 CPNE7Q9UBL6 633 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 ZNHIT2Q9UHR6 403 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 ENTPD4Q9Y227 616 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 KCNK6Q9Y257 313 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 ZDHHC9Q9Y397 364 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 PCYT1BQ9Y5K3 369 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-231ENST00000515620 NF1P21359 2839 aa10.39□□□□□ -0.75
CLDND1-231ENST00000515620 A0A0U1RQS6 177 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 ARHGAP42A6NI28 874 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 LILRA5A6NI73 299 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 BIN1O00499 593 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 FGF10O15520 208 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-231ENST00000515620 ASMTLO95671 621 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 FGFR1OPO95684 399 aaKnown RBP10.38□□□□□ -0.75
CLDND1-231ENST00000515620 CYP2A6P11509 494 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-231ENST00000515620 FGF5P12034 268 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 ACP5P13686 325 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 SLC2A4P14672 509 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 TYRP1P17643 537 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 PTPN4P29074 926 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 TPI1P60174 286 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 CDK18Q07002 472 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 ELOAQ14241 798 aaKnown RBP10.38□□□□□ -0.75
CLDND1-231ENST00000515620 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLDND1-231ENST00000515620 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 SCYL2Q6P3W7 929 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 FAM199XQ6PEV8 388 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-231ENST00000515620 RFLNAQ6ZTI6 216 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 SYVN1Q86TM6 617 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 PPP1R3BQ86XI6 285 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 MCEMP1Q8IX19 187 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 RHOT1Q8IXI2 618 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 IQCKQ8N0W5 287 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 LZTR1Q8N653 840 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 RBMXL3Q8N7X1 1067 aaKnown RBP10.38□□□□□ -0.75
CLDND1-231ENST00000515620 FDCSPQ8NFU4 85 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 AP2M1Q96CW1 435 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 RANBP9Q96S59 729 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 C11orf70Q9BRQ4 267 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 NUDT9Q9BW91 350 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 SLC39A8Q9C0K1 460 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 AKIRIN1Q9H9L7 192 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-231ENST00000515620 METRNQ9UJH8 293 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 G3BP2Q9UN86 482 aaKnown RBP10.38□□□□□ -0.75
CLDND1-231ENST00000515620 PCDHGC4Q9Y5F7 938 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 PCDHGB7Q9Y5F8 929 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 CROCCQ5TZA2 2017 aa10.38□□□□□ -0.75
CLDND1-231ENST00000515620 KIR2DS5A0A0G2JLQ3 304 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 A0A0G2JNG1 304 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 A6NL46 340 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 KIR2DS3K7RE56 304 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 PSMD11O00231 422 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 DFFAO00273 331 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 HTRA2O43464 458 aaPredicted RBP10.37□□□□□ -0.75
CLDND1-231ENST00000515620 KIF1CO43896 1103 aaKnown RBP10.37□□□□□ -0.75
CLDND1-231ENST00000515620 CEACAM4O75871 244 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 UBXN7O94888 489 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 ATP1A1P05023 1023 aaKnown RBP10.37□□□□□ -0.75
CLDND1-231ENST00000515620 F3P13726 295 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 GPD1P21695 349 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 MMP8P22894 467 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 RFC1P35251 1148 aaPredicted RBP10.37□□□□□ -0.75
CLDND1-231ENST00000515620 ITGA1P56199 1179 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 RPS15P62841 145 aaKnown RBP10.37□□□□□ -0.75
CLDND1-231ENST00000515620 DPTQ07507 201 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 NSUN2Q08J23 767 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLDND1-231ENST00000515620 KIR2DS5Q14953 304 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 PWWP2BQ6NUJ5 590 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 ARHGAP36Q6ZRI8 547 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 HPS6Q86YV9 775 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 CBARPQ8N350 705 aaPredicted RBP10.37□□□□□ -0.75
CLDND1-231ENST00000515620 CISD2Q8N5K1 135 aaKnown RBP10.37□□□□□ -0.75
CLDND1-231ENST00000515620 SCAMP4Q969E2 229 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 GPR87Q9BY21 358 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 ABCG8Q9H221 673 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 KIAA1468Q9P260 1216 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 FZD10Q9ULW2 581 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 PHTF1Q9UMS5 762 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 FHOD1Q9Y613 1164 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 CELSR1Q9NYQ6 3014 aa10.37□□□□□ -0.75
CLDND1-231ENST00000515620 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.36□□□□□ -0.75
CLDND1-231ENST00000515620 GOLGA6L4A6NEF3 574 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 ZNF185O15231 689 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 TOX3O15405 576 aaPredicted RBP10.36□□□□□ -0.75
CLDND1-231ENST00000515620 CCP110O43303 1012 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 DNAJC6O75061 913 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 SOCS5O75159 536 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 KRT3P12035 628 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 AMD1P17707 334 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 CTPS1P17812 591 aa10.36□□□□□ -0.75
CLDND1-231ENST00000515620 UBE2IP63279 158 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms