RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 DNAJC6O75061 913 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 LIPCP11150 499 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 TNNT1P13805 278 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 ITIH1P19827 911 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 COMTP21964 271 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 NR2C2P49116 596 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 HADHBP55084 474 aaKnown RBP17.34■□□□□ 0.37
DDX41-217ENST00000515562 DCDC1P59894 354 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 GPLD1P80108 840 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 TFDP2Q14188 446 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 INO80CQ6PI98 192 aaPredicted RBP17.34■□□□□ 0.37
DDX41-217ENST00000515562 SARM1Q6SZW1 724 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 NPNTQ6UXI9 565 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 CCDC81Q6ZN84 652 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 WBP1Q96G27 269 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 WDR24Q96S15 920 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 CCNL2Q96S94 520 aaPredicted RBP17.34■□□□□ 0.37
DDX41-217ENST00000515562 NUDT22Q9BRQ3 303 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 B3GNT4Q9C0J1 378 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 ZFYVE1Q9HBF4 777 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 MAGEE1Q9HCI5 957 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 RAD18Q9NS91 495 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 ZNHIT2Q9UHR6 403 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 CNOT6Q9ULM6 557 aaKnown RBP17.34■□□□□ 0.37
DDX41-217ENST00000515562 PLEKHM1Q9Y4G2 1056 aa17.34■□□□□ 0.37
DDX41-217ENST00000515562 A0A0A6YYK5 440 aaPredicted RBP17.33■□□□□ 0.36
DDX41-217ENST00000515562 PPM1DO15297 605 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 ATP1A1P05023 1023 aaKnown RBP17.33■□□□□ 0.36
DDX41-217ENST00000515562 SLC2A4P14672 509 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 CD1CP29017 333 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 CDKN2BP42772 138 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 C19orf57Q0VDD7 668 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 SQSTM1Q13501 440 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 TRA2AQ13595 282 aaKnown RBP eCLIP17.33■□□□□ 0.361e-6■□□□□ 9.3
DDX41-217ENST00000515562 C16orf72Q14CZ0 275 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 TAF1BQ53T94 588 aaPredicted RBP17.33■□□□□ 0.36
DDX41-217ENST00000515562 ZNF569Q5MCW4 686 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 TMEM164Q5U3C3 297 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 PDPK2PQ6A1A2 396 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 MFSD7Q6UXD7 560 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 CHST15Q7LFX5 561 aaPredicted RBP17.33■□□□□ 0.36
DDX41-217ENST00000515562 SFRP1Q8N474 314 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 OR4D9Q8NGE8 314 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 TADA1Q96BN2 335 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 SRPK1Q96SB4 655 aaKnown RBP17.33■□□□□ 0.36
DDX41-217ENST00000515562 ZSCAN5AQ9BUG6 496 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 STN1Q9H668 368 aaKnown RBP17.33■□□□□ 0.36
DDX41-217ENST00000515562 KCNK4Q9NYG8 393 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 NFKBIL1Q9UBC1 381 aaPredicted RBP17.33■□□□□ 0.36
DDX41-217ENST00000515562 HYOU1Q9Y4L1 999 aa17.33■□□□□ 0.36
DDX41-217ENST00000515562 OAS3Q9Y6K5 1087 aaKnown RBP17.33■□□□□ 0.36
DDX41-217ENST00000515562 FASNP49327 2511 aaKnown RBP17.33■□□□□ 0.36
DDX41-217ENST00000515562 IGHV1OR21-1A0A087WYE8 117 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 PRAMEF33A0A0G2JMD5 474 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 IGHV5-10-1A0A0J9YXX1 117 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 GPR89AB7ZAQ6 455 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 MTSS1O43312 755 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 PRAMEF10O60809 474 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 PRB1P04280 392 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 GPR89BP0CG08 455 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 CD82P27701 267 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 NOP2P46087 812 aaKnown RBP17.32■□□□□ 0.36
DDX41-217ENST00000515562 LIMK2P53671 638 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 CDK18Q07002 472 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 PRKD1Q15139 912 aaPredicted RBP17.32■□□□□ 0.36
DDX41-217ENST00000515562 PCSK7Q16549 785 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 TAZQ16635 292 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 TEX44Q53QW1 395 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 CCDC70Q6NSX1 233 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 USP53Q70EK8 1073 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 SLC37A2Q8TED4 501 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 TFB1MQ8WVM0 346 aaKnown RBP17.32■□□□□ 0.36
DDX41-217ENST00000515562 CCDC74BQ96LY2 380 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 SLC38A3Q99624 504 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 HERPUD2Q9BSE4 406 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 SPATA16Q9BXB7 569 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 TRIM5Q9C035 493 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 ZMYND15Q9H091 742 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 CARD9Q9H257 536 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 GLOD4Q9HC38 313 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 LUC7LQ9NQ29 371 aaKnown RBP17.32■□□□□ 0.36
DDX41-217ENST00000515562 ZNF711Q9Y462 761 aa17.32■□□□□ 0.36
DDX41-217ENST00000515562 MGAQ8IWI9 3026 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 NUAK1O60285 661 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 CST8O60676 142 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 NDST3O95803 873 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 SLC4A1P02730 911 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 ACP5P13686 325 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 PTPN3P26045 913 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 ETV5P41161 510 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 MAGEA1P43355 309 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 MAPK10P53779 464 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 TFDP3Q5H9I0 405 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 ALS2CLQ60I27 953 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 PCSK4Q6UW60 755 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 SPOCD1Q6ZMY3 1216 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 KDELC2Q7Z4H8 507 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 PHYKPLQ8IUZ5 450 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 TRAM1L1Q8N609 369 aa17.31■□□□□ 0.36
DDX41-217ENST00000515562 TC2NQ8N9U0 490 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms