RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 TNFAIP3P21580 790 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 CLCN3P51790 818 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 TFAP4Q01664 338 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 ILF3Q12906 894 aaKnown RBP eCLIP4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 ADIPOQQ15848 244 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 DECR1Q16698 335 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 CCDC96Q2M329 555 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 ACCSLQ4AC99 568 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 TMEM35AQ53FP2 167 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 ZNF280DQ6N043 979 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 FOXL2NBQ6ZUU3 175 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 MAATS1Q7Z4T9 603 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 SLC9B2Q86UD5 537 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 ADSSL1Q8N142 457 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 LMNTD1Q8N9Z9 388 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 TEX19Q8NA77 164 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 PPHLN1Q8NEY8 458 aaKnown RBP4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 OR13A1Q8NGR1 328 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 BBS10Q8TAM1 723 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 HMGCLL1Q8TB92 370 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 POMGNT1Q8WZA1 660 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 TAAR8Q969N4 342 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 NCAPGQ9BPX3 1015 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 PLEKHA5Q9HAU0 1116 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 KRT84Q9NSB2 600 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 RALYQ9UKM9 306 aaKnown RBP4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 MTMR6Q9Y217 621 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 R3HDM2Q9Y2K5 976 aaKnown RBP4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 ADAM18Q9Y3Q7 739 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 PIAS3Q9Y6X2 628 aa4.7□□□□□ -1.66
SMARCA5-203ENST00000515531 A0A087X0M5 115 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 A0A1B0GX30 115 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 A0A1W2PS18 150 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 IGLV2-11P01706 119 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 CRYAAP02489 173 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 HLA-DOBP13765 273 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 ITGA2P17301 1181 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 CDH2P19022 906 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 POLR2CP19387 275 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 AMPHP49418 695 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 TERF1P54274 439 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 GALCP54803 685 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 ISL1P61371 349 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 LRMPQ12912 555 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 CDC16Q13042 620 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 MAMLD1Q13495 774 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 GTF2H2Q13888 395 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 PDE1CQ14123 709 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 PNLIPRP3Q17RR3 467 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 ZSCAN23Q3MJ62 389 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 C18orf63Q68DL7 685 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 GTF2H2CQ6P1K8 395 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 NCEH1Q6PIU2 408 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 Q6ZTC4 211 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 ZNF771Q7L3S4 317 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 RNF168Q8IYW5 571 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 MUC20Q8N307 709 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 METTL27Q8N6F8 245 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 IL17RCQ8NAC3 791 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 THAP6Q8TBB0 222 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 RHBDF1Q96CC6 855 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 SEPT5Q99719 369 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 SYT17Q9BSW7 474 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 CSTL1Q9H114 145 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 FKRPQ9H9S5 495 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 TXLNGQ9NUQ3 528 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 ABCF3Q9NUQ8 709 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 COPG2Q9UBF2 871 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 UBA2Q9UBT2 640 aaPredicted RBP4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 STK39Q9UEW8 545 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 ZNF711Q9Y462 761 aa4.69□□□□□ -1.66
SMARCA5-203ENST00000515531 RUSC2Q8N2Y8 1516 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 KCNN4O15554 427 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 HCRTR2O43614 444 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 LMX1BO60663 402 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 IGKV3-20P01619 116 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 TMEM11P17152 192 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 PPARGP37231 505 aaPredicted RBP4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 FMO5P49326 533 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 PRAMEP78395 509 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 MRPS34P82930 218 aaKnown RBP4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 ARL16Q0P5N6 197 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 ZNF234Q14588 700 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 GLDNQ6ZMI3 551 aaPredicted RBP4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 SEPT14Q6ZU15 432 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 PXKQ7Z7A4 578 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 MAP7D3Q8IWC1 876 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 OR1J2Q8NGS2 313 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 OR8K5Q8NH50 307 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 OR5R1Q8NH85 324 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 ZKSCAN4Q969J2 545 aaPredicted RBP4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 NODALQ96S42 347 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 PCYT2Q99447 389 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 NEURL2Q9BR09 285 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 PDZD7Q9H5P4 517 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 SH2D4AQ9H788 454 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 CORO1CQ9ULV4 474 aaPredicted RBP4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 OR2W1Q9Y3N9 320 aa4.68□□□□□ -1.66
SMARCA5-203ENST00000515531 CLIC4Q9Y696 253 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms