RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 SMAD1Q15797 465 aaKnown RBP4.53□□□□□ -1.68
RUFY3-215ENST00000515479 FBXL22Q6P050 247 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 RHBDF2Q6PJF5 856 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 CWC27Q6UX04 472 aaKnown RBP4.53□□□□□ -1.68
RUFY3-215ENST00000515479 COPS6Q7L5N1 327 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 MTERF4Q7Z6M4 381 aaKnown RBP4.53□□□□□ -1.68
RUFY3-215ENST00000515479 TICAM2Q86XR7 235 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 SMAP1Q8IYB5 467 aaPredicted RBP4.53□□□□□ -1.68
RUFY3-215ENST00000515479 PGBD5Q8N414 524 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 ZNF114Q8NC26 417 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 STT3BQ8TCJ2 826 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 NCSTNQ92542 709 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 GUCD1Q96NT3 240 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 CRB3Q9BUF7 120 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 DDX23Q9BUQ8 820 aaKnown RBP4.53□□□□□ -1.68
RUFY3-215ENST00000515479 COA1Q9GZY4 146 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 SDF2L1Q9HCN8 221 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 HMG20BQ9P0W2 317 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 PAM16Q9Y3D7 125 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 DDX49Q9Y6V7 483 aaKnown RBP4.53□□□□□ -1.68
RUFY3-215ENST00000515479 ZSWIM8A7E2V4 1837 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 VCANP13611 3396 aa4.53□□□□□ -1.68
RUFY3-215ENST00000515479 SSC5DA1L4H1 1573 aa4.53□□□□□ -1.69
RUFY3-215ENST00000515479 MAGEA13PA6NCF6 341 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 PRR23AA6NEV1 266 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 LMX1BO60663 402 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 CASTP20810 708 aaKnown RBP4.52□□□□□ -1.69
RUFY3-215ENST00000515479 SERPINB3P29508 390 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 FMO4P31512 558 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 GJC1P36383 396 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 CCDC173Q0VFZ6 552 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 AIMP1Q12904 312 aaKnown RBP4.52□□□□□ -1.69
RUFY3-215ENST00000515479 ILF3Q12906 894 aaKnown RBP eCLIP4.52□□□□□ -1.69
RUFY3-215ENST00000515479 G3BP1Q13283 466 aaKnown RBP eCLIP4.52□□□□□ -1.69
RUFY3-215ENST00000515479 CAPSQ13938 189 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 ME3Q16798 604 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 ADCK5Q3MIX3 580 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 CCDC152Q4G0S7 254 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 DCAF6Q58WW2 860 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 CAVIN1Q6NZI2 390 aaKnown RBP4.52□□□□□ -1.69
RUFY3-215ENST00000515479 KLHL24Q6TFL4 600 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 NEK10Q6ZWH5 1172 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 ZNF771Q7L3S4 317 aaPredicted RBP4.52□□□□□ -1.69
RUFY3-215ENST00000515479 ATG9AQ7Z3C6 839 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 ZNF589Q86UQ0 364 aaPredicted RBP4.52□□□□□ -1.69
RUFY3-215ENST00000515479 NAGSQ8N159 534 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 LMNTD1Q8N9Z9 388 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 NEK9Q8TD19 979 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 TMEM255BQ8WV15 326 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 SECTM1Q8WVN6 248 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 MTBPQ96DY7 904 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 DEFB118Q96PH6 123 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 ISCA1Q9BUE6 129 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 ALDH8A1Q9H2A2 487 aaPredicted RBP4.52□□□□□ -1.69
RUFY3-215ENST00000515479 GPR108Q9NPR9 543 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 PCDHAC2Q9Y5I4 1007 aa4.52□□□□□ -1.69
RUFY3-215ENST00000515479 MORC2Q9Y6X9 1032 aaPredicted RBP4.52□□□□□ -1.69
RUFY3-215ENST00000515479 GREB1LQ9C091 1923 aaPredicted RBP4.52□□□□□ -1.69
RUFY3-215ENST00000515479 MYH4Q9Y623 1939 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 A0A0U1RQG5 324 aaPredicted RBP4.51□□□□□ -1.69
RUFY3-215ENST00000515479 PRAC2D3DTV9 90 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 NPIPB11E5RHQ5 1161 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 SLC25A17O43808 307 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 CIAO1O76071 339 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 CTPS1P17812 591 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 MYF6P23409 242 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 PRKAA2P54646 552 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 LPIN1Q14693 890 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 RPE65Q16518 533 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 CALCRLQ16602 461 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 MRGPRG-AS1Q2M3A8 158 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 STPG1Q5TH74 334 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 TANGO2Q6ICL3 276 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 NOL8Q76FK4 1167 aaKnown RBP4.51□□□□□ -1.69
RUFY3-215ENST00000515479 ERO1BQ86YB8 467 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 ANKRD18AQ8IVF6 992 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 MB21D2Q8IYB1 491 aaPredicted RBP4.51□□□□□ -1.69
RUFY3-215ENST00000515479 CCDC105Q8IYK2 499 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 GHDCQ8N2G8 530 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 AADATQ8N5Z0 425 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 CCDC191Q8NCU4 936 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 SETD9Q8NE22 299 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 MCPH1Q8NEM0 835 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 OR6Y1Q8NGX8 325 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 TRIB2Q92519 343 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 KTI12Q96EK9 354 aaPredicted RBP4.51□□□□□ -1.69
RUFY3-215ENST00000515479 WBP1Q96G27 269 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 SCMH1Q96GD3 660 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 ZSCAN31Q96LW9 406 aaPredicted RBP4.51□□□□□ -1.69
RUFY3-215ENST00000515479 JAKMIP1Q96N16 626 aaKnown RBP4.51□□□□□ -1.69
RUFY3-215ENST00000515479 NAP1L5Q96NT1 182 aaPredicted RBP4.51□□□□□ -1.69
RUFY3-215ENST00000515479 OR1F2PQ96R84 312 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 PARK7Q99497 189 aaKnown RBP4.51□□□□□ -1.69
RUFY3-215ENST00000515479 CDX2Q99626 313 aaPredicted RBP4.51□□□□□ -1.69
RUFY3-215ENST00000515479 FSD1Q9BTV5 496 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 CTDSP1Q9GZU7 261 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 SIL1Q9H173 461 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 C11orf49Q9H6J7 331 aa4.51□□□□□ -1.69
RUFY3-215ENST00000515479 VEZTQ9HBM0 779 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms