RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CHST15Q7LFX5 561 aaPredicted RBP11.41□□□□□ -0.58
VCAN-212ENST00000515397 B3GNT8Q7Z7M8 397 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 BLOC1S5Q8TDH9 187 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 ZDHHC1Q8WTX9 485 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 COX14Q96I36 57 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 FCRL5Q96RD9 977 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 FICDQ9BVA6 458 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 FOXP3Q9BZS1 431 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 OR2AG1Q9H205 316 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 MAGEE1Q9HCI5 957 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 EVA1BQ9NVM1 165 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 LRIT1Q9P2V4 623 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 DNPEPQ9ULA0 475 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 UNC13CQ8NB66 2214 aa11.41□□□□□ -0.58
VCAN-212ENST00000515397 A0A1W2PQM1 296 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 GOLGA6L6A8MZA4 724 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 GPR39O43194 453 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 MTSS1O43312 755 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 UGT1A9O60656 530 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 SNX2O60749 519 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 DNAJC6O75061 913 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 TJP3O95049 919 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 SLC25A14O95258 325 aaPredicted RBP11.4□□□□□ -0.58
VCAN-212ENST00000515397 IVLP07476 585 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 ZNF8P17098 575 aaPredicted RBP11.4□□□□□ -0.58
VCAN-212ENST00000515397 UGT1A6P19224 532 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 UGT1A1P22309 533 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 UGT1A4P22310 534 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 PSMB4P28070 264 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 TEAD1P28347 426 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 ALDH4A1P30038 563 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 UGT1A3P35503 534 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 UGT1A5P35504 534 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 CETN2P41208 172 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 OR1D5P58170 312 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 ILF3Q12906 894 aaKnown RBP eCLIP11.4□□□□□ -0.58
VCAN-212ENST00000515397 XRCC4Q13426 336 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 KIF26BQ2KJY2 2108 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 ISXQ2M1V0 245 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 AMZ1Q400G9 498 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 C14orf28Q4W4Y0 310 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 ANKRD20A2Q5SQ80 823 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 ANKRD20A1Q5TYW2 823 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 ANKRD20A3Q5VUR7 823 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 USP53Q70EK8 1073 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 NLRP8Q86W28 1048 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 ZNF761Q86XN6 746 aaPredicted RBP11.4□□□□□ -0.58
VCAN-212ENST00000515397 TTC30BQ8N4P2 665 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 UBL4BQ8N7F7 174 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 FAM71DQ8N9W8 422 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 NAT14Q8WUY8 206 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 NAT6Q93015 286 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 SCARF2Q96GP6 870 aaPredicted RBP11.4□□□□□ -0.58
VCAN-212ENST00000515397 NAF1Q96HR8 494 aaKnown RBP11.4□□□□□ -0.58
VCAN-212ENST00000515397 DEPDC7Q96QD5 511 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 OR2M4Q96R27 311 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 GSDMCQ9BYG8 508 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 UGT1A7Q9HAW7 530 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 UGT1A10Q9HAW8 530 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 UGT1A8Q9HAW9 530 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 LZTFL1Q9NQ48 299 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 TRNAU1APQ9NX07 287 aaKnown RBP11.4□□□□□ -0.58
VCAN-212ENST00000515397 NCKIPSDQ9NZQ3 722 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 ATXN10Q9UBB4 475 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 TMPRSS11EQ9UL52 423 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 KCNK6Q9Y257 313 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 KCTD3Q9Y597 815 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 ZFHX4Q86UP3 3567 aa11.4□□□□□ -0.58
VCAN-212ENST00000515397 LRP4O75096 1905 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 B4GAT1O43505 415 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 ACP5P13686 325 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 HGFP14210 728 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 ITPKBP27987 946 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 PTPN7P35236 360 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 PDX1P52945 283 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 GSDMDP57764 484 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 GABREP78334 506 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 SPIDRQ14159 915 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 HLTFQ14527 1009 aaKnown RBP eCLIP11.39□□□□□ -0.59
VCAN-212ENST00000515397 RTP5Q14D33 572 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 SLC1A5Q15758 541 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 PLA2G4EQ3MJ16 856 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 KHDC1Q4VXA5 237 aaKnown RBP11.39□□□□□ -0.59
VCAN-212ENST00000515397 C3orf38Q5JPI3 329 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 NKAIN2Q5VXU1 208 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 CRTC3Q6UUV7 619 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 RBM44Q6ZP01 1051 aaKnown RBP11.39□□□□□ -0.59
VCAN-212ENST00000515397 TMPRSS9Q7Z410 1059 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 PRUNE1Q86TP1 453 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 GALNT13Q8IUC8 556 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 CCNJLQ8IV13 435 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 CDKL3Q8IVW4 592 aaPredicted RBP11.39□□□□□ -0.59
VCAN-212ENST00000515397 SYCE1Q8N0S2 351 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 NAGSQ8N159 534 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 ARL14Q8N4G2 192 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 ATG4AQ8WYN0 398 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 NXPE2Q96DL1 559 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 CRELD1Q96HD1 420 aa11.39□□□□□ -0.59
VCAN-212ENST00000515397 HES6Q96HZ4 224 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms