RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MARCKSL1P49006 195 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 OR1D5P58170 312 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 WASHC5Q12768 1159 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 CLN3Q13286 438 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 ATMQ13315 3056 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 PCSK7Q16549 785 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 TFDP3Q5H9I0 405 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 ZNF569Q5MCW4 686 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 BZW1Q7L1Q6 419 aaKnown RBP10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 GPR155Q7Z3F1 870 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 TMC3Q7Z5M5 1100 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 GPR26Q8NDV2 337 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 SPATA22Q8NHS9 363 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 SNRNP27Q8WVK2 155 aaKnown RBP10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 TFB1MQ8WVM0 346 aaKnown RBP10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 MRFAP1L1Q96HT8 127 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 TEKT5Q96M29 485 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 QKIQ96PU8 341 aaKnown RBP eCLIP10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 ZFYVE1Q9HBF4 777 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 CPNE5Q9HCH3 593 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 MAGEE1Q9HCI5 957 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 RAD18Q9NS91 495 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 SAE1Q9UBE0 346 aaPredicted RBP10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 TFR2Q9UP52 801 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 ZNF711Q9Y462 761 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 PCDHA13Q9Y5I0 950 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 ADGRG1Q9Y653 693 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 CACNA1GO43497 2377 aa10.37□□□□□ -0.75
HMGXB3-205ENST00000514469 ASXL3Q9C0F0 2248 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 IGHV1OR21-1A0A087WYE8 117 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 A6NCN8 305 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 PPM1DO15297 605 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 ZW10O43264 779 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 ASMTLO95671 621 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 NDST3O95803 873 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 EML2O95834 649 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 PIRTP0C851 137 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 JMJD7P0C870 316 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 ITIH1P19827 911 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 NFKB1P19838 968 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 CD1CP29017 333 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 ALDH4A1P30038 563 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 SLC5A2P31639 672 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 CSF2RBP32927 897 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 CD68P34810 354 aaPredicted RBP10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 ZNF75DP51815 510 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 SQSTM1Q13501 440 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 COL9A2Q14055 689 aaPredicted RBP10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 PPP2R5EQ16537 467 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 AMZ1Q400G9 498 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 KAZNQ674X7 775 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 PDPK2PQ6A1A2 396 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 KDELC1Q6UW63 502 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 KDELC2Q7Z4H8 507 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 PIM3Q86V86 326 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 SFRP1Q8N474 314 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 TRAM1L1Q8N609 369 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 SLC37A2Q8TED4 501 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 KRT35Q92764 455 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 RBM41Q96IZ5 413 aaKnown RBP10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 PANX2Q96RD6 677 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 NUDT22Q9BRQ3 303 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 ZSCAN5AQ9BUG6 496 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 SPATA16Q9BXB7 569 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 CARD9Q9H257 536 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 SEMA6CQ9H3T2 930 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 RMI1Q9H9A7 625 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 RDH14Q9HBH5 336 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 LUC7LQ9NQ29 371 aaKnown RBP10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 PISDQ9UG56 409 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 SHOC2Q9UQ13 582 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 PRKAB1Q9Y478 270 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 SPO11Q9Y5K1 396 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 URB1O60287 2271 aaKnown RBP10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 MGAQ8IWI9 3026 aa10.36□□□□□ -0.75
HMGXB3-205ENST00000514469 IGHV5-10-1A0A0J9YXX1 117 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 LOC285095A0A1B0GVY8 99 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 RCCD1A6NED2 376 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 SOWAHDA6NJG2 315 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 GPR89AB7ZAQ6 455 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 TK2O00142 265 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 HGSO14964 777 aaPredicted RBP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 NVLO15381 856 aaKnown RBP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 MTSS1O43312 755 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 NUAK1O60285 661 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 PMPCBO75439 489 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 ZRANB2O95218 330 aaKnown RBP eCLIP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 NDUFA10O95299 355 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 SLC4A1P02730 911 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 GPR89BP0CG08 455 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 CTNNA1P35221 906 aaKnown RBP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 ETV5P41161 510 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 GPLD1P80108 840 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 C16orf72Q14CZ0 275 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 LLGL1Q15334 1064 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 SPA17Q15506 151 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 PHF19Q5T6S3 580 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 ALS2CLQ60I27 953 aa10.35□□□□□ -0.75
HMGXB3-205ENST00000514469 PCSK4Q6UW60 755 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms